RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 MOB4Q9Y3A3 225 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 RBM7Q9Y580 266 aaKnown RBP8.19□□□□□ -1.1
HDAC6-222ENST00000478095 A0A1B0GUS0 222 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 SMIM31A0A1B0GVY4 71 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 NCBP2LA6PVI3 153 aaKnown RBP8.18□□□□□ -1.1
HDAC6-222ENST00000478095 M0R1X1 148 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 CTDSP2O14595 271 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 ITGB1BP1O14713 200 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 RGS5O15539 181 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 PROP1O75360 226 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 DIRAS3O95661 229 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 MOSP00540 346 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 HLA-DQB1P01920 261 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 AMY1AP04745 511 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 AMY2AP04746 511 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 CD1BP29016 333 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 PROK1P58294 105 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 LINC00205P59089 165 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 KRTAP10-3P60369 221 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 RNASE12Q5GAN4 147 aaKnown RBP8.18□□□□□ -1.1
HDAC6-222ENST00000478095 C9orf152Q5JTZ5 239 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 HIST2H2BDQ6DRA6 164 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 CNIH2Q6PI25 160 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 FAM131AQ6UXB0 335 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 C16orf82Q7Z2V1 217 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 LAX1Q8IWV1 398 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 H1FOOQ8IZA3 346 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-222ENST00000478095 OR2T10Q8NGZ9 312 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 SNAPC3Q92966 411 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 C5orf30Q96GV9 206 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 CMTM3Q96MX0 182 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 ZNF747Q9BV97 191 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 PRSS22Q9GZN4 317 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 TOLLIPQ9H0E2 274 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 MIXL1Q9H2W2 232 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 EXTL2Q9UBQ6 330 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 ZNF221Q9UK13 617 aa8.18□□□□□ -1.1
HDAC6-222ENST00000478095 CTXN2P0C2S0 81 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 CT45A6P0DMU7 189 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 CT45A5P0DMU8 189 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 CT45A7P0DMV0 189 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 VSIG10L2P0DP72 767 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 PRSS3P35030 304 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 CBX5P45973 191 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 EBI3Q14213 229 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 FAM71F2Q6NXP2 309 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 Q8N2B8 174 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 Q8N6K4 173 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 KLHDC1Q8N7A1 406 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 C5orf56Q8N8D9 126 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 RITA1Q96K30 269 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 DCUN1D5Q9BTE7 237 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 C6orf62Q9GZU0 229 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-222ENST00000478095 RBM38Q9H0Z9 239 aaKnown RBP8.17□□□□□ -1.1
HDAC6-222ENST00000478095 SERTAD4Q9NUC0 356 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 SDHAF2Q9NX18 166 aa8.17□□□□□ -1.1
HDAC6-222ENST00000478095 RSL24D1Q9UHA3 163 aaKnown RBP8.17□□□□□ -1.1
HDAC6-222ENST00000478095 ELOA3CA0A087WX78 387 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-222ENST00000478095 IGKV1D-13A0A0B4J2D9 117 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 H0YJW9 148 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 H7C2Y5 167 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 M0QZK8 103 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 PMP2P02689 132 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 IGKV1-13P0DP09 117 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 CNTFRP26992 372 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 VDAC2P45880 294 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-222ENST00000478095 F2RL1P55085 397 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 MMDQ15546 238 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 C11orf88Q6PI97 169 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 SHISA2Q6UWI4 295 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 C11orf44Q8N8P7 122 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 ZNF383Q8NA42 475 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 OR5AP2Q8NGF4 316 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 SLIRPQ9GZT3 109 aaKnown RBP8.16□□□□□ -1.1
HDAC6-222ENST00000478095 GHITMQ9H3K2 345 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 NECAP2Q9NVZ3 263 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 OR2W1Q9Y3N9 320 aa8.16□□□□□ -1.1
HDAC6-222ENST00000478095 FGF16O43320 207 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 PEX14O75381 377 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 TUSC2O75896 110 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 OR5H8P0DN80 308 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 AADACP22760 399 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 HLA-DMAP28067 261 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 FCGR2CP31995 323 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 LUMP51884 338 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-222ENST00000478095 FXYD4P59646 89 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 ACTBP60709 375 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 CDK10Q15131 360 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 Q8N9W7 124 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-222ENST00000478095 OR5AN1Q8NGI8 311 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 MCFD2Q8NI22 146 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 GPX8Q8TED1 209 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 PLSCR3Q9NRY6 295 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 EHFQ9NZC4 300 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 ANAPC10Q9UM13 185 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 WASHC3Q9Y3C0 194 aa8.15□□□□□ -1.1
HDAC6-222ENST00000478095 OR5H14A6NHG9 310 aa8.14□□□□□ -1.11
HDAC6-222ENST00000478095 PPYP01298 95 aa8.14□□□□□ -1.11
HDAC6-222ENST00000478095 APOA2P02652 100 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms