RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 CPMP14384 443 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 HIST1H1DP16402 221 aaKnown RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 HOXB4P17483 251 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 FGF9P31371 208 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 FAUP35544 74 aaKnown RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 PTGDSP41222 190 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 KIR2DL2P43627 348 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 TFPI2P48307 235 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 DAP3P51398 398 aaKnown RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 FOXG1P55316 489 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 DLX6P56179 175 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 DUSP2Q05923 314 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 GAGE4Q13068 117 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 OR1Q1Q15612 314 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 SRSF7Q16629 238 aaKnown RBP eCLIP5.04□□□□□ -1.61e-8■□□□□ 9.4
TRA2B-211ENST00000477939 GGTA1PQ4G0N0 100 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 CLEC12AQ5QGZ9 265 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 FRG2Q64ET8 278 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 SLC48A1Q6P1K1 146 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 ARL9Q6T311 187 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 PLXDC2Q6UX71 529 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 RPS27LQ71UM5 84 aaKnown RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 MEPCEQ7L2J0 689 aaKnown RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 COMMD6Q7Z4G1 85 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 ZNF440Q8IYI8 595 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 TMEM151AQ8N4L1 468 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 KRTCAP2Q8N6L1 136 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 STPG4Q8N801 248 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 PTGR2Q8N8N7 351 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 C9orf106Q8NAJ2 232 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 TMEM116Q8NCL8 245 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 NOXO1Q8NFA2 376 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 OR5AK2Q8NH90 309 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 MBD3L2Q8NHZ7 208 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 WDYHV1Q96HA8 205 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 AP1S3Q96PC3 154 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 FRG2BQ96QU4 278 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 P2RX4Q99571 388 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 SLC25A33Q9BSK2 321 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 ABHD14AQ9BUJ0 271 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 CHIAQ9BZP6 476 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 ENY2Q9NPA8 101 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 HINT3Q9NQE9 182 aaKnown RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 GPR84Q9NQS5 396 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 JKAMPQ9P055 326 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 SLC25A10Q9UBX3 287 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-211ENST00000477939 PCTPQ9UKL6 214 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 ETV7Q9Y603 341 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 ARID1AO14497 2285 aa5.04□□□□□ -1.6
TRA2B-211ENST00000477939 A0A1W2PPR1 153 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 A0A1W2PRF3 423 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 A0A1W2PRM7 423 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 hADV38S2A0JD32 116 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 GAGE10A6NGK3 116 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 F8VVB4 439 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 F8VWA3 439 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-211ENST00000477939 NME4O00746 187 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 TAAR5O14804 337 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 TNFRSF13BO14836 293 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-211ENST00000477939 CD8AP01732 235 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 CRYAAP02489 173 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 ATP1B1P05026 303 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 SBK3P0C264 359 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 NTSP30990 170 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 LHX2P50458 406 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 PAX9P55771 341 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 RPS23P62266 143 aaKnown RBP5.03□□□□□ -1.6
TRA2B-211ENST00000477939 LCN6P62502 163 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 ADAM8P78325 824 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 MEF2BQ02080 365 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-211ENST00000477939 PNRC1Q12796 327 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-211ENST00000477939 FOXF2Q12947 444 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 EXOSC7Q15024 291 aaKnown RBP5.03□□□□□ -1.6
TRA2B-211ENST00000477939 DAZAP2Q15038 168 aaPredicted RBP5.03□□□□□ -1.6
TRA2B-211ENST00000477939 SYPL1Q16563 259 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 SMN1Q16637 294 aaKnown RBP5.03□□□□□ -1.6
TRA2B-211ENST00000477939 MS4A18Q3C1V0 323 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 ALG10Q5BKT4 473 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 FAM162BQ5T6X4 162 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 HLA-DQA1Q5Y7H0 255 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 STUMQ69YW2 141 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 ASPHD2Q6ICH7 369 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 CBLN3Q6UW01 205 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 C12orf54Q6X4T0 127 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 Q6ZTK2 550 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 ESPNLQ6ZVH7 1005 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 ADGRE4PQ86SQ3 457 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 LRP11Q86VZ4 500 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 KRTAP1-3Q8IUG1 177 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 OR2T27Q8NH04 317 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 MFSD8Q8NHS3 518 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 LINC01560Q8TB33 94 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 GPR148Q8TDV2 347 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 PPCDCQ96CD2 204 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 MBD6Q96DN6 1003 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 SMIM19Q96E16 107 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 OXGR1Q96P68 337 aa5.03□□□□□ -1.6
TRA2B-211ENST00000477939 TBX15Q96SF7 602 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms