RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 OR10X1Q8NGY0 326 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 RNASE11Q8TAA1 199 aaKnown RBP1.2□□□□□ -2.22
VPS50-213ENST00000477572 LMX1AQ8TE12 382 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 TAMM41Q96BW9 452 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 FMC1Q96HJ9 113 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 TMEM56Q96MV1 263 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 PFDN5Q99471 154 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 ANAPC13Q9BS18 74 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 DDA1Q9BW61 102 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 CDCA4Q9BXL8 241 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 UGT2B28Q9BY64 529 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 TLNRD1Q9H1K6 362 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 MFSD1Q9H3U5 465 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 TMBIM4Q9HC24 238 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 VCX3AQ9NNX9 186 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.2□□□□□ -2.22
VPS50-213ENST00000477572 FGFR1OP2Q9NVK5 253 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 VAPAQ9P0L0 249 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 GSKIPQ9P0R6 139 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 RBM12B-AS1Q9P1G2 102 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 ARL2BPQ9Y2Y0 163 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 PRELID3BQ9Y3B1 194 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 NUBP2Q9Y5Y2 271 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 MTCH2Q9Y6C9 303 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 TMEM56-RWDD3S4R434 201 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 NPATQ14207 1427 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 PPIP5K1Q6PFW1 1433 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 VWDEQ8N2E2 1590 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 KIF24Q5T7B8 1368 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 RTL9Q8NET4 1388 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 DOCK10Q96BY6 2186 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 RIMS1Q86UR5 1692 aaKnown RBP1.2□□□□□ -2.22
VPS50-213ENST00000477572 CLUHO75153 1309 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 ZNF532Q9HCE3 1301 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 AQRO60306 1485 aaKnown RBP eCLIP1.19□□□□□ -2.22
VPS50-213ENST00000477572 SNAPC4Q5SXM2 1469 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 ZNF518AQ6AHZ1 1483 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 MRC2Q9UBG0 1479 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 STRCP1A6NGW2 1772 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 IGKV1D-37A0A075B6S9 117 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 A0A1B0GTI1 187 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 A0A1B0GX12 115 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 CCDC144AA2RUR9 1427 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 SMIM9A6NGZ8 99 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 METTL15A6NJ78 407 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 FTCDNL1E5RQL4 147 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 M0R036 132 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 TXNDC9O14530 226 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 GYG2O15488 501 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 CST8O60676 142 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 HPGDSO60760 199 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 ALOX12BO75342 701 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 ATP6V1G2O95670 118 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 IFNA16P05015 189 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 FBP1P09467 338 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 FAM228BP0C875 321 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 SCGB1C2P0DMR2 95 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 CTLA4P16410 223 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 S100PP25815 95 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 ADORA1P30542 326 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 GRPRP30550 384 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 ARR3P36575 388 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 MAGEA12P43365 314 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 DNASE1L1P49184 302 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 IDH3GP51553 393 aaPredicted RBP1.19□□□□□ -2.22
VPS50-213ENST00000477572 TAS2R41P59536 307 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 SNAP25P60880 206 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 NAA20P61599 178 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 TFAMQ00059 246 aaKnown RBP1.19□□□□□ -2.22
VPS50-213ENST00000477572 TRIP13Q15645 432 aaPredicted RBP1.19□□□□□ -2.22
VPS50-213ENST00000477572 TMEM176BQ3YBM2 270 aaPredicted RBP1.19□□□□□ -2.22
VPS50-213ENST00000477572 OR10J3Q5JRS4 329 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 RBM48Q5RL73 367 aaKnown RBP1.19□□□□□ -2.22
VPS50-213ENST00000477572 TMEM42Q69YG0 159 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 RPL13AP3Q6NVV1 102 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 NIPAL1Q6NVV3 410 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 CD200R1LQ6Q8B3 271 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 Q6ZT83 130 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 FAM19A1Q7Z5A9 133 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 TMED4Q7Z7H5 227 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 GALNT10Q86SR1 603 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 BLIDQ8IZY5 108 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 CA13Q8N1Q1 262 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 CLDN22Q8N7P3 220 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 Q8NAQ8 132 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 ST6GALNAC3Q8NDV1 305 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 TMEM161BQ8NDZ6 487 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 ATP6V1C2Q8NEY4 427 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 OR1M1Q8NGA1 313 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 OR8J3Q8NGG0 315 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 OR10D4PQ8NGN7 298 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 OR13D1Q8NGV5 346 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 OR5AK3PQ8NH89 298 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 SCGB1C1Q8TD33 95 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 C16orf78Q8WTQ4 265 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 TWIST2Q8WVJ9 160 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 RORBQ92753 470 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 MAL2Q969L2 176 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 TLCD1Q96CP7 247 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 CPNE2Q96FN4 548 aaPredicted RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms