RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 M0QZ24 198 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 PEX14O75381 377 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 TSPAN15O95858 294 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 CD3DP04234 171 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 SPNP16150 400 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 RCC1P18754 421 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-221ENST00000477561 HLA-DMAP28067 261 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 OR3A3P47888 321 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 REG1BP48304 166 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 HNF4GQ14541 408 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 HERPUD1Q15011 391 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 SRSF7Q16629 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
HDAC6-221ENST00000477561 VAX1Q5SQQ9 334 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 TMEM17Q86X19 198 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 GVQW1Q8N7I0 195 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 BEST4Q8NFU0 473 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 OR10A7Q8NGE5 316 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 OR10V1Q8NGI7 309 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 OR4C16Q8NGL9 310 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 OR5H2Q8NGV7 314 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 OR10X1Q8NGY0 326 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 OR1L1Q8NH94 360 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 FAM110DQ8TAY7 271 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-221ENST00000477561 RPEQ96AT9 228 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 PRRT1Q99946 306 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 SLC25A33Q9BSK2 321 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 ST6GALNAC5Q9BVH7 336 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 SERTAD4Q9NUC0 356 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 MGAT4AQ9UM21 535 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 AMMECR1Q9Y4X0 333 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-221ENST00000477561 MGAM2Q2M2H8 2515 aa6.62□□□□□ -1.35
HDAC6-221ENST00000477561 INMT-MINDY4F8WBC2 141 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 SLC31A2O15432 143 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 DHFRP00374 187 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 HBZP02008 142 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 TCRBP04435 133 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 AMY2AP04746 511 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 FCER2P06734 321 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 SNRNP70P08621 437 aaKnown RBP6.61□□□□□ -1.35
HDAC6-221ENST00000477561 FCGR3AP08637 254 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 CD28P10747 220 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 BTCP35070 178 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 VDAC2P45880 294 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-221ENST00000477561 ARHGDIBP52566 201 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 LOXL3P58215 753 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 ARPC4P59998 168 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 HES1Q14469 280 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 RBMS2Q15434 407 aaKnown RBP6.61□□□□□ -1.35
HDAC6-221ENST00000477561 ABCA11PQ4W5N1 156 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 C9orf152Q5JTZ5 239 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 CCDC144NLQ6NUI1 221 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 Q6ZS49 121 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 MOB1BQ7L9L4 216 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 MOB3BQ86TA1 216 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 ARRDC1Q8N5I2 433 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 DRAM1Q8N682 238 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 OR5AP2Q8NGF4 316 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 OR56B4Q8NH76 319 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 SNAPC3Q92966 411 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 RBMXL1Q96E39 390 aaKnown RBP6.61□□□□□ -1.35
HDAC6-221ENST00000477561 RBM14Q96PK6 669 aaKnown RBP6.61□□□□□ -1.35
HDAC6-221ENST00000477561 SLC25A21Q9BQT8 299 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-221ENST00000477561 MARVELD1Q9BSK0 173 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 TAF9BQ9HBM6 251 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 GFOD1Q9NXC2 390 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 SLC2A8Q9NY64 477 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 GNG12Q9UBI6 72 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 ANXA10Q9UJ72 324 aa6.61□□□□□ -1.35
HDAC6-221ENST00000477561 VWFP04275 2813 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 MEGF8Q7Z7M0 2845 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 hCG_2014768A0A024R1R8 64 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 TRBV6-6A0A0A6YYG2 114 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 IGHV3-72A0A0B4J1Y9 119 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 A0A1B0GVG6 124 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 A0A1W2PPI3 338 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 OOSP1A8MZH6 123 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 M0QYG6 137 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 HSD17B6O14756 317 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 SPINT2O43291 252 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 OR2F2O95006 317 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 NDUFB6O95139 128 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 NAPSAO96009 420 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 PMP2P02689 132 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 AMY1AP04745 511 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 H2AFB2P0C5Z0 115 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 FAM106CPP0CH98 169 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 HRH1P35367 487 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 ECI1P42126 302 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 RAB7AP51149 207 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 CCR6P51684 374 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 ZNF134P52741 427 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 TSPAN5P62079 268 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 KIR2DS1Q14954 304 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 NSUN5P1Q3KNT7 163 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 SCGB2B2Q4G0G5 96 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 C6orf183Q5T699 404 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 FAAP20Q6NZ36 180 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 C11orf88Q6PI97 169 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 IDO2Q6ZQW0 420 aa6.6□□□□□ -1.35
HDAC6-221ENST00000477561 GAPTQ8N292 157 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms