RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 RIMS4Q9H426 269 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-214ENST00000477152 SLA2Q9H6Q3 261 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 TAF9BQ9HBM6 251 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 ISYNA1Q9NPH2 558 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 FOXA2Q9Y261 457 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-214ENST00000477152 OR5H14A6NHG9 310 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 RAB29O14966 203 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 LIMS3P0CW19 117 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 LIMS4P0CW20 117 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 EGR2P11161 476 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-214ENST00000477152 MGMTP16455 207 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 IGFBP3P17936 291 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-214ENST00000477152 GTF2A1P52655 376 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-214ENST00000477152 F2RL1P55085 397 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 TATDN3Q17R31 274 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 C5orf64Q2M2E5 130 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 MOGAT2Q3SYC2 334 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 MOB1BQ7L9L4 216 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF439Q8NDP4 499 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 NPBQ8NG41 125 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 MYOZ3Q8TDC0 251 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 GHSRQ92847 366 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 RCHY1Q96PM5 261 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 HSPB9Q9BQS6 159 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 CHMP1AQ9HD42 196 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-214ENST00000477152 SMPD3Q9NY59 655 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-214ENST00000477152 DIMT1Q9UNQ2 313 aaKnown RBP5.64□□□□□ -1.51
BRCA1-214ENST00000477152 WSB1Q9Y6I7 421 aa5.64□□□□□ -1.51
BRCA1-214ENST00000477152 A0A0G2JLM5 398 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 TRBV5-5A0A0J9YX44 114 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 A0A1W2PN81 502 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 I3L521 148 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 MYL12BO14950 172 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 ATP6V0E1O15342 81 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 SPRY2O43597 315 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 PDCD6O75340 191 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 SC5DO75845 299 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 MAS1P04201 325 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 HSPB1P04792 205 aaKnown RBP5.63□□□□□ -1.51
BRCA1-214ENST00000477152 SLC2A2P11168 524 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-214ENST00000477152 GP9P14770 177 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 CHRNA7P36544 502 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 CBX3Q13185 183 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 UTF1Q5T230 341 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 GLT8D1Q68CQ7 371 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 LYPD6Q86Y78 171 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 GAPTQ8N292 157 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 OR1L1Q8NH94 360 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 TSNAXQ99598 290 aaKnown RBP5.63□□□□□ -1.51
BRCA1-214ENST00000477152 SLC29A1Q99808 456 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 STUB1Q9UNE7 303 aa5.63□□□□□ -1.51
BRCA1-214ENST00000477152 EFCAB10A6NFE3 127 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 H7C2Y5 167 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 LDLRAD4O15165 306 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 IFNA6P05013 189 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 LGALS1P09382 135 aaKnown RBP5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ZP3P21754 424 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ETV1P50549 477 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ECSCRQ19T08 205 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 DMKNQ6E0U4 476 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF833PQ6ZTB9 187 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ANKRD13BQ86YJ7 626 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 UBALD1Q8TB05 177 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 RGP1Q92546 391 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-214ENST00000477152 DCUN1D4Q92564 292 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 TMEM68Q96MH6 324 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 NABP2Q9BQ15 211 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 CENPOQ9BU64 300 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ANKRD60Q9BZ19 345 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 IGHV7-81A0A0B4J1V7 117 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 C13orf42A0A1B0GVH6 325 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF736B4DX44 427 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-214ENST00000477152 H0Y980 276 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 H3BUA1 57 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ITGB1BP1O14713 200 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 RRHO14718 337 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 SLC22A1O15245 554 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 SLC31A2O15432 143 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 HSPA12AO43301 675 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 NDUFA3O95167 84 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 BLVRBP30043 206 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-214ENST00000477152 CRIP2P52943 208 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ADARB1P78563 741 aaKnown RBP5.62□□□□□ -1.51
BRCA1-214ENST00000477152 AKIRIN2Q53H80 203 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ACTBL2Q562R1 376 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 CASC10Q5T4H9 136 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 OR2G6Q5TZ20 316 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 CD200R1LQ6Q8B3 271 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 MS4A15Q8N5U1 240 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 MINDY2Q8NBR6 621 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 KCNG3Q8TAE7 436 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ISOC1Q96CN7 298 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF503Q96F45 646 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 URM1Q9BTM9 101 aaKnown RBP5.62□□□□□ -1.51
BRCA1-214ENST00000477152 BANF2Q9H503 90 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 GNB4Q9HAV0 340 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 RANGRFQ9HD47 186 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-214ENST00000477152 AASSQ9UDR5 926 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF221Q9UK13 617 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms