RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TRIM64CA6NLI5 447 aa9□□□□□ -0.97
VARS2-208ENST00000477052 H0YJW9 148 aa9□□□□□ -0.97
VARS2-208ENST00000477052 PROP1O75360 226 aa9□□□□□ -0.97
VARS2-208ENST00000477052 NAPSAO96009 420 aa9□□□□□ -0.97
VARS2-208ENST00000477052 GSTP1P09211 210 aaKnown RBP9□□□□□ -0.97
VARS2-208ENST00000477052 SCTP09683 121 aa9□□□□□ -0.97
VARS2-208ENST00000477052 MAP2K4P45985 399 aa9□□□□□ -0.97
VARS2-208ENST00000477052 DEFA5Q01523 94 aa9□□□□□ -0.97
VARS2-208ENST00000477052 MLLT11Q13015 90 aaPredicted RBP9□□□□□ -0.97
VARS2-208ENST00000477052 KCTD21Q4G0X4 260 aa9□□□□□ -0.97
VARS2-208ENST00000477052 GLT8D1Q68CQ7 371 aa9□□□□□ -0.97
VARS2-208ENST00000477052 ZNF880Q6PDB4 577 aa9□□□□□ -0.97
VARS2-208ENST00000477052 ZNF367Q7RTV3 350 aa9□□□□□ -0.97
VARS2-208ENST00000477052 ZNF554Q86TJ5 538 aa9□□□□□ -0.97
VARS2-208ENST00000477052 PPP1R27Q86WC6 154 aa9□□□□□ -0.97
VARS2-208ENST00000477052 THRSPQ92748 146 aa9□□□□□ -0.97
VARS2-208ENST00000477052 TOLLIPQ9H0E2 274 aa9□□□□□ -0.97
VARS2-208ENST00000477052 C11orf54Q9H0W9 315 aaPredicted RBP9□□□□□ -0.97
VARS2-208ENST00000477052 LPAR5Q9H1C0 372 aa9□□□□□ -0.97
VARS2-208ENST00000477052 ACOT13Q9NPJ3 140 aa9□□□□□ -0.97
VARS2-208ENST00000477052 PLEKHJ1Q9NW61 149 aa9□□□□□ -0.97
VARS2-208ENST00000477052 GHRLQ9UBU3 117 aa9□□□□□ -0.97
VARS2-208ENST00000477052 FOXA2Q9Y261 457 aaPredicted RBP9□□□□□ -0.97
VARS2-208ENST00000477052 NUBP2Q9Y5Y2 271 aa9□□□□□ -0.97
VARS2-208ENST00000477052 TMEM14DPA8MWL7 114 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 LINC01619G3V211 115 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 RAB29O14966 203 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 SLC22A1O15245 554 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 IGKV1-16P04430 117 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 CD3GP09693 182 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 UBBP0CG47 229 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 SRMP19623 302 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 CEACAM6P40199 344 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 CLDN12P56749 244 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 PLA2G7Q13093 441 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 TPBGQ13641 420 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 PSG5Q15238 335 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 SRSF7Q16629 238 aaKnown RBP eCLIP8.99□□□□□ -0.97
VARS2-208ENST00000477052 HSD17B12Q53GQ0 312 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 LIPKQ5VXJ0 399 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 ZNF660Q6AZW8 331 aaPredicted RBP8.99□□□□□ -0.97
VARS2-208ENST00000477052 ZNF773Q6PK81 442 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 UNQ5815/PRO19632Q6UWF5 114 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 SPARTQ8N0X7 666 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 MS4A15Q8N5U1 240 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 LFNGQ8NES3 379 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 KCNG3Q8TAE7 436 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 UFD1Q92890 307 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 PPP1R14BQ96C90 147 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 RCHY1Q96PM5 261 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 MGLLQ99685 303 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 CHCHD6Q9BRQ6 235 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 AGMATQ9BSE5 352 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 TM2D1Q9BX74 207 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 PIPOXQ9P0Z9 390 aa8.99□□□□□ -0.97
VARS2-208ENST00000477052 METTL1Q9UBP6 276 aaKnown RBP8.99□□□□□ -0.97
VARS2-208ENST00000477052 AK6Q9Y3D8 172 aaKnown RBP8.99□□□□□ -0.97
VARS2-208ENST00000477052 IGKV1-6A0A0C4DH72 117 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 CA2P00918 260 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 LGALS1P09382 135 aaKnown RBP8.98□□□□□ -0.97
VARS2-208ENST00000477052 FRMD6-AS1P0C7T7 363 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 HSMCR30P0CW71 290 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 CPEP16870 476 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 INSL3P51460 131 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 TPPP2P59282 170 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 RPS25P62851 125 aaKnown RBP8.98□□□□□ -0.97
VARS2-208ENST00000477052 HLA-DRB3P79483 266 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 ACTBL2Q562R1 376 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 LY6G6FQ5SQ64 297 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 UBE2UQ5VVX9 321 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 ZNF429Q86V71 674 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 ZNF383Q8NA42 475 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 GRPEL2Q8TAA5 225 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 FCGR1BQ92637 280 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 ARHGAP5-AS1Q96IT6 56 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 PLGRKTQ9HBL7 147 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 WASHC3Q9Y3C0 194 aa8.98□□□□□ -0.97
VARS2-208ENST00000477052 TENM2Q9NT68 2774 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 ANKRD34BA5PLL1 514 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 OR5H14A6NHG9 310 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 ARPC1BO15143 372 aaKnown RBP8.97□□□□□ -0.97
VARS2-208ENST00000477052 HSPA12AO43301 675 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 SLC25A17O43808 307 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 TNFAIP8O95379 198 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 BPNT1O95861 308 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 UCHL1P09936 223 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 GP9P14770 177 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 PSMA1P25786 263 aaKnown RBP8.97□□□□□ -0.97
VARS2-208ENST00000477052 VEGFCP49767 419 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 CRIP2P52943 208 aaPredicted RBP8.97□□□□□ -0.97
VARS2-208ENST00000477052 TMEM50BP56557 158 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 RPS16P62249 146 aaKnown RBP8.97□□□□□ -0.97
VARS2-208ENST00000477052 PJVKQ0ZLH3 352 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 TRAM1Q15629 374 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 FAM71F2Q6NXP2 309 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 ACSM6Q6P461 480 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 TMEM91Q6ZNR0 172 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 OR5T1Q8NG75 326 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 OR5AN1Q8NGI8 311 aa8.97□□□□□ -0.97
VARS2-208ENST00000477052 PHYHIPQ92561 330 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms