RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SEBOXQ9HB31 216 aaPredicted RBP13.77□□□□□ -0.21
TMEM53-208ENST00000476724 IGHV1-18A0A0C4DH31 117 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 IFNA4P05014 189 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 COL10A1Q03692 680 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 TNFRSF9Q07011 255 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 HAGHQ16775 308 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 ZNF66Q6ZN08 573 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 LILRB2Q8N423 598 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 OR10G4Q8NGN3 311 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 FAM216AQ8WUB2 273 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 PINX1Q96BK5 328 aaKnown RBP13.76□□□□□ -0.21
TMEM53-208ENST00000476724 C20orf24Q9BUV8 137 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.76□□□□□ -0.21
TMEM53-208ENST00000476724 HSPB7Q9UBY9 170 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 MAP1BP46821 2468 aaKnown RBP13.76□□□□□ -0.21
TMEM53-208ENST00000476724 PTBP3O95758 552 aaKnown RBP13.76□□□□□ -0.21
TMEM53-208ENST00000476724 P0C879 139 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 MAS1LP35410 378 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 ICAM4Q14773 271 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 SPANXN5Q5MJ07 72 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 FAM90A1Q86YD7 464 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 MBD3L1Q8WWY6 194 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 SNRNP40Q96DI7 357 aaKnown RBP13.76□□□□□ -0.21
TMEM53-208ENST00000476724 MSL2Q9HCI7 577 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 UFSP2Q9NUQ7 469 aa13.76□□□□□ -0.21
TMEM53-208ENST00000476724 PUS1Q9Y606 427 aaKnown RBP eCLIP13.76□□□□□ -0.21
TMEM53-208ENST00000476724 ADH4P08319 380 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 C1QTNF9P0C862 333 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 HTD2P86397 168 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 ARL16Q0P5N6 197 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 ATP6V1FQ16864 119 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 EIF2S3LQ2VIR3 472 aaKnown RBP13.75□□□□□ -0.21
TMEM53-208ENST00000476724 TMEM14EPQ6UXP3 125 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 HAPLN4Q86UW8 402 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 MRGPRDQ8TDS7 321 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 HSD17B10Q99714 261 aaKnown RBP13.75□□□□□ -0.21
TMEM53-208ENST00000476724 WDR61Q9GZS3 305 aaKnown RBP13.75□□□□□ -0.21
TMEM53-208ENST00000476724 SLC25A15Q9Y619 301 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 SPINT2O43291 252 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
TMEM53-208ENST00000476724 RBKSQ9H477 322 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 RPRMQ9NS64 109 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 TIMM9Q9Y5J7 89 aa13.75□□□□□ -0.21
TMEM53-208ENST00000476724 LRRC30A6NM36 301 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 H3BQ15 152 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 RAB29O14966 203 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 CLDN14O95500 239 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 CLDN1O95832 211 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 AGAP20933 346 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 TIMP3P35625 211 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 CFHR2P36980 270 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 GLIPR1P48060 266 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 UCNP55089 124 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 RPL30P62888 115 aaKnown RBP13.74□□□□□ -0.21
TMEM53-208ENST00000476724 ZNF474Q6S9Z5 364 aaPredicted RBP13.74□□□□□ -0.21
TMEM53-208ENST00000476724 DOLPP1Q86YN1 238 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 PPP1R35Q8TAP8 253 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 LRRC29Q8WV35 223 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 MALSU1Q96EH3 234 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 RSG1Q9BU20 258 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 FZR1Q9UM11 496 aa13.74□□□□□ -0.21
TMEM53-208ENST00000476724 A0A087WWC5 75 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 LOC102723971A0A1B0GUV8 181 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 RAMP3O60896 148 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 KRASP01116 189 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 DAOP14920 347 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 RAB5AP20339 215 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 GZMHP20718 246 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 PRDX2P32119 198 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 AKR1D1P51857 326 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 C3orf36Q3SXR2 165 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 C2CD4CQ8TF44 421 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 TCTEX1D2Q8WW35 142 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 EDARADDQ8WWZ3 215 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 C5orf30Q96GV9 206 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 CIB3Q96Q77 187 aaPredicted RBP13.73□□□□□ -0.21
TMEM53-208ENST00000476724 OR4C12Q96R67 309 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 G6PCP35575 357 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 SLC38A11Q08AI6 406 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 TMEM41BQ5BJD5 291 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 CENPVQ7Z7K6 275 aaPredicted RBP13.73□□□□□ -0.21
TMEM53-208ENST00000476724 ZNF429Q86V71 674 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 ZFP82Q8N141 532 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 ZNF808Q8N4W9 903 aaPredicted RBP13.73□□□□□ -0.21
TMEM53-208ENST00000476724 OR13A1Q8NGR1 328 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 TAF15Q92804 592 aaKnown RBP eCLIP13.73□□□□□ -0.21
TMEM53-208ENST00000476724 ISOC2Q96AB3 205 aa13.73□□□□□ -0.21
TMEM53-208ENST00000476724 CISD1Q9NZ45 108 aaKnown RBP13.73□□□□□ -0.21
TMEM53-208ENST00000476724 A0A1W2PPH5 198 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 ODAMA1E959 279 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 SRRM5B3KS81 715 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 CEACAM8P31997 349 aaPredicted RBP13.72□□□□□ -0.21
TMEM53-208ENST00000476724 ZNF816Q0VGE8 651 aaPredicted RBP13.72□□□□□ -0.21
TMEM53-208ENST00000476724 PMS2P11Q13670 270 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 TIMM23BQ5SRD1 257 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 ZNF787Q6DD87 383 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 GFRALQ6UXV0 394 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 SLC35E3Q7Z769 313 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 FAM24BQ8N5W8 94 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 CD177Q8N6Q3 437 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms