RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 OR14A2Q96R54 314 aa12.39□□□□□ -0.43
APOBEC3F-203ENST00000476513 TINAGL1Q9GZM7 467 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3F-203ENST00000476513 PARP12Q9H0J9 701 aaKnown RBP12.39□□□□□ -0.43
APOBEC3F-203ENST00000476513 AMBNQ9NP70 447 aa12.39□□□□□ -0.43
APOBEC3F-203ENST00000476513 PEMTQ9UBM1 199 aa12.39□□□□□ -0.43
APOBEC3F-203ENST00000476513 STEAP1Q9UHE8 339 aa12.39□□□□□ -0.43
APOBEC3F-203ENST00000476513 KIAA1109Q2LD37 5005 aa12.39□□□□□ -0.43
APOBEC3F-203ENST00000476513 PDCD6O75340 191 aa12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 SPDEFO95238 335 aa12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 BAG2O95816 211 aa12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 IGKV1-16P04430 117 aa12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 FCGR1AP12314 374 aa12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 MGMTP16455 207 aa12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 GABRB1P18505 474 aa12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 OR13C5Q8NGS8 318 aa12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 CENPNQ96H22 339 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 ABHD14BQ96IU4 210 aa12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 TSNAXQ99598 290 aaKnown RBP12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 OVOL2Q9BRP0 275 aa12.38□□□□□ -0.43
APOBEC3F-203ENST00000476513 TRAV8-7A0A075B6U6 113 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 AIREO43918 545 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 RBMXL2O75526 392 aaKnown RBP12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 CRTAPO75718 401 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 LIMS3P0CW19 117 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 LIMS4P0CW20 117 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 CPEP16870 476 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 RPS16P62249 146 aaKnown RBP12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 CCDC58Q4VC31 144 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 AWAT2Q6E213 333 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 CEMP1Q6PRD7 247 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 JAGN1Q8N5M9 183 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 DRAXINQ8NBI3 349 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 OR52I1Q8NGK6 324 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 SNAPC3Q92966 411 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 AGMATQ9BSE5 352 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 ABRACLQ9P1F3 81 aa12.37□□□□□ -0.43
APOBEC3F-203ENST00000476513 H3BNX3 289 aa12.36□□□□□ -0.43
APOBEC3F-203ENST00000476513 DEDDO75618 318 aa12.36□□□□□ -0.43
APOBEC3F-203ENST00000476513 ALPLP05186 524 aa12.36□□□□□ -0.43
APOBEC3F-203ENST00000476513 EWSR1Q01844 656 aaKnown RBP eCLIP12.36□□□□□ -0.43
APOBEC3F-203ENST00000476513 PJVKQ0ZLH3 352 aa12.36□□□□□ -0.43
APOBEC3F-203ENST00000476513 GUCA2BQ16661 112 aa12.36□□□□□ -0.43
APOBEC3F-203ENST00000476513 DEFB114Q30KQ6 69 aa12.36□□□□□ -0.43
APOBEC3F-203ENST00000476513 ZIK1Q3SY52 487 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3F-203ENST00000476513 USMG5Q96IX5 58 aa12.36□□□□□ -0.43
APOBEC3F-203ENST00000476513 TRBV5-5A0A0J9YX44 114 aa12.35□□□□□ -0.43
APOBEC3F-203ENST00000476513 PROP1O75360 226 aa12.35□□□□□ -0.43
APOBEC3F-203ENST00000476513 LINC00205P59089 165 aa12.35□□□□□ -0.43
APOBEC3F-203ENST00000476513 ZNF383Q8NA42 475 aa12.35□□□□□ -0.43
APOBEC3F-203ENST00000476513 DYNLRB2Q8TF09 96 aa12.35□□□□□ -0.43
APOBEC3F-203ENST00000476513 TMEM68Q96MH6 324 aa12.35□□□□□ -0.43
APOBEC3F-203ENST00000476513 SULT4A1Q9BR01 284 aa12.35□□□□□ -0.43
APOBEC3F-203ENST00000476513 COA4Q9NYJ1 87 aa12.35□□□□□ -0.43
APOBEC3F-203ENST00000476513 CKLFQ9UBR5 152 aa12.35□□□□□ -0.43
APOBEC3F-203ENST00000476513 RYR1P21817 5038 aa12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 A0A0B4J203 849 aa12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 A0A0J9YWU9 116 aa12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 BMPR1BO00238 502 aa12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 LGALS7P47929 136 aa12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 GATAD1Q8WUU5 269 aa12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 SMIM19Q96E16 107 aa12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 WDR89Q96FK6 387 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 ZC4H2Q9NQZ6 224 aa12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 MRPS18AQ9NVS2 196 aaKnown RBP12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 ORC6Q9Y5N6 252 aa12.34□□□□□ -0.43
APOBEC3F-203ENST00000476513 ITGB1BP1O14713 200 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 OGG1O15527 345 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 IGLV2-23P01705 113 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 KIR2DS2P43631 304 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 OR2G6Q5TZ20 316 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 PDPNQ86YL7 162 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 SVOPQ8N4V2 548 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 RHOXF1Q8NHV9 184 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 FAM46BQ96A09 425 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 Q96MT0 163 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 FAAP24Q9BTP7 215 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 GGTLC1Q9BX51 225 aa12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 C11orf54Q9H0W9 315 aaPredicted RBP12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 KLK5Q9Y337 293 aaPredicted RBP12.33□□□□□ -0.44
APOBEC3F-203ENST00000476513 EI24O14681 340 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 CRYGBP07316 175 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 EDN2P20800 178 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 CAPGP40121 348 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 ETV1P50549 477 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 RPS11P62280 158 aaKnown RBP eCLIP12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 Q499Y3 187 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 ZNF880Q6PDB4 577 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 SLC16A13Q7RTY0 426 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 CDH26Q8IXH8 852 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 KCTD12Q96CX2 325 aaKnown RBP12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 NEDD4LQ96PU5 975 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 OR1A1Q9P1Q5 309 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 RPL36Q9Y3U8 105 aaKnown RBP12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 HECTD4Q9Y4D8 3996 aa12.32□□□□□ -0.44
APOBEC3F-203ENST00000476513 TRBV5-7A0A0A0MS05 114 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 A0A1W2PPK0 400 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 C2orf70A6NJV1 201 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 NAPSAO96009 420 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 LALBAP00709 142 aa12.31□□□□□ -0.44
APOBEC3F-203ENST00000476513 APOA2P02652 100 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms