RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 GAR1Q9NY12 217 aaKnown RBP8.32□□□□□ -1.08
CDRT1-205ENST00000475944 GAB2Q9UQC2 676 aa8.32□□□□□ -1.08
CDRT1-205ENST00000475944 TENM2Q9NT68 2774 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 H3BUA1 57 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 NAPSAO96009 420 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 CA2P00918 260 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 CPEP16870 476 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 ZBTB25P24278 435 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 VEGFCP49767 419 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 PSG5Q15238 335 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 GLT8D1Q68CQ7 371 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 OR10K2Q6IF99 312 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 ZNF880Q6PDB4 577 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 HAPLN4Q86UW8 402 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 GGHQ92820 318 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 SPATA25Q9BR10 227 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 AGMATQ9BSE5 352 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 TM2D1Q9BX74 207 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 RIMS4Q9H426 269 aaPredicted RBP8.31□□□□□ -1.08
CDRT1-205ENST00000475944 EDA2RQ9HAV5 297 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 ZNF355PQ9NSJ1 428 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 PLEKHJ1Q9NW61 149 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 MGAT4AQ9UM21 535 aa8.31□□□□□ -1.08
CDRT1-205ENST00000475944 A0A0G2JLM5 398 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 C13orf42A0A1B0GVH6 325 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 H0Y980 276 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 APOA2P02652 100 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 ARSBP15848 533 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 HTR2CP28335 458 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 RPS16P62249 146 aaKnown RBP8.3□□□□□ -1.08
CDRT1-205ENST00000475944 HLA-DRB3P79483 266 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 FXYD3Q14802 87 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 MOGAT2Q3SYC2 334 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 C1orf100Q5SVJ3 147 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 POC5Q8NA72 575 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 GRPEL2Q8TAA5 225 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 NICN1Q9BSH3 213 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 PARP12Q9H0J9 701 aaKnown RBP8.3□□□□□ -1.08
CDRT1-205ENST00000475944 ZNF221Q9UK13 617 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 DNAH7Q8WXX0 4024 aa8.3□□□□□ -1.08
CDRT1-205ENST00000475944 DYNC2H1Q8NCM8 4307 aaKnown RBP8.3□□□□□ -1.08
CDRT1-205ENST00000475944 TRBV6-6A0A0A6YYG2 114 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 IGKV1-16P04430 117 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 IFNA6P05013 189 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 CEACAM6P40199 344 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 ACSM3Q53FZ2 586 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 RBM48Q5RL73 367 aaKnown RBP8.29□□□□□ -1.08
CDRT1-205ENST00000475944 AHSA2Q719I0 299 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 GTSCR1Q86UQ5 136 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 PDPNQ86YL7 162 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 DHRSXQ8N5I4 330 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 MS4A15Q8N5U1 240 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 DRAXINQ8NBI3 349 aaPredicted RBP8.29□□□□□ -1.08
CDRT1-205ENST00000475944 OR9G4Q8NGQ1 327 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 PHYHIPQ92561 330 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 PTX4Q96A99 478 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 URM1Q9BTM9 101 aaKnown RBP8.29□□□□□ -1.08
CDRT1-205ENST00000475944 C11orf54Q9H0W9 315 aaPredicted RBP8.29□□□□□ -1.08
CDRT1-205ENST00000475944 C8orf4Q9NR00 106 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 OR1A1Q9P1Q5 309 aa8.29□□□□□ -1.08
CDRT1-205ENST00000475944 ANKRD34BA5PLL1 514 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 TMEM14DPA8MWL7 114 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 SLC25A17O43808 307 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 CNIH1O95406 144 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 BPNT1O95861 308 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 AADACP22760 399 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 UNC119Q13432 240 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 KLF5Q13887 457 aaPredicted RBP8.28□□□□□ -1.08
CDRT1-205ENST00000475944 INSL4Q14641 139 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 TATDN3Q17R31 274 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 LCN12Q6JVE5 192 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 ADAMTSL5Q6ZMM2 481 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 LRRTM1Q86UE6 522 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 C8orf59Q8N0T1 100 aaPredicted RBP8.28□□□□□ -1.08
CDRT1-205ENST00000475944 PACRGLQ8N7B6 248 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 NANOGP1Q8N7R0 232 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 OR6M1Q8NGM8 313 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 TMEM68Q96MH6 324 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 KCNK15Q9H427 330 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 TUBA4BQ9H853 241 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 C12orf4Q9NQ89 552 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 SLC35D1Q9NTN3 355 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 PSORS1C1Q9UIG5 152 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 AK3Q9UIJ7 227 aa8.28□□□□□ -1.08
CDRT1-205ENST00000475944 A0A0A6YYD4 124 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 PROP1O75360 226 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 SCTP09683 121 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 SRMP19623 302 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 LGALS7P47929 136 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 SYNJ2BPP57105 145 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 QRFPP83859 136 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 HAGHQ16775 308 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 HSD17B12Q53GQ0 312 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 ZNF383Q8NA42 475 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.27□□□□□ -1.09
CDRT1-205ENST00000475944 OR5T1Q8NG75 326 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 HDHD3Q9BSH5 251 aaPredicted RBP8.27□□□□□ -1.09
CDRT1-205ENST00000475944 TMED9Q9BVK6 235 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 LPAR5Q9H1C0 372 aa8.27□□□□□ -1.09
CDRT1-205ENST00000475944 Q9N2K0 584 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms