RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 WNK1Q9H4A3 2382 aa12.87□□□□□ -0.35
SRM-204ENST00000475189 HPGDSO60760 199 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 ELK1P19419 428 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 CBX5P45973 191 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 HIST2H2BDQ6DRA6 164 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 MZT2AQ6P582 158 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 FAM131AQ6UXB0 335 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 FAM71E2Q8N5Q1 922 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.86□□□□□ -0.35
SRM-204ENST00000475189 OR5AN1Q8NGI8 311 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 BCL7BQ9BQE9 202 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 OR2D2Q9H210 308 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 SCOCQ9UIL1 159 aa12.86□□□□□ -0.35
SRM-204ENST00000475189 PLXNB1O43157 2135 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 OR5H14A6NHG9 310 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 H0YJW9 148 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 PEX14O75381 377 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 HLA-DQB1P01920 261 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 NFYAP23511 347 aaPredicted RBP12.85□□□□□ -0.35
SRM-204ENST00000475189 CNTFRP26992 372 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 LINC00205P59089 165 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 ACTBP60709 375 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 C11orf44Q8N8P7 122 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 DRAXINQ8NBI3 349 aaPredicted RBP12.85□□□□□ -0.35
SRM-204ENST00000475189 AP3S1Q92572 193 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 C5orf30Q96GV9 206 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 LIN7CQ9NUP9 197 aaKnown RBP12.85□□□□□ -0.35
SRM-204ENST00000475189 SDHAF2Q9NX18 166 aa12.85□□□□□ -0.35
SRM-204ENST00000475189 RBM7Q9Y580 266 aaKnown RBP12.85□□□□□ -0.35
SRM-204ENST00000475189 PKD1L1Q8TDX9 2849 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 MEIS3P1A6NDR6 274 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 M0R1X1 148 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 IGHG2P01859 326 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 FCER2P06734 321 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 MC5RP33032 325 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 ARPC4P59998 168 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 MMDQ15546 238 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 PRR31Q5SQ13 230 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 ZNF383Q8NA42 475 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 SNAPC3Q92966 411 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 RASL11BQ9BPW5 248 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 ANAPC10Q9UM13 185 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 WASHC3Q9Y3C0 194 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 OR2W1Q9Y3N9 320 aa12.84□□□□□ -0.35
SRM-204ENST00000475189 SMIM31A0A1B0GVY4 71 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 LINC01548A6NM66 108 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 J3QRK9 145 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 FBXO24O75426 580 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 TUSC2O75896 110 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 CD28P10747 220 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 PRSS3P35030 304 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 SLC35E3Q7Z769 313 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 CENPVQ7Z7K6 275 aaPredicted RBP12.83□□□□□ -0.36
SRM-204ENST00000475189 NPBQ8NG41 125 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 OR5AU1Q8NGC0 362 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 DYNC2LI1Q8TCX1 351 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 ISOC1Q96CN7 298 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 MRPS7Q9Y2R9 242 aaKnown RBP12.83□□□□□ -0.36
SRM-204ENST00000475189 CMYA5Q8N3K9 4069 aa12.83□□□□□ -0.36
SRM-204ENST00000475189 IGKV1D-13A0A0B4J2D9 117 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 FAM25AB3EWG3 89 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 FAM25CB3EWG5 89 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 FAM25GB3EWG6 89 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 H3BMQ9 156 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 H7C2Y5 167 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 NBR2O15453 112 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 NDUFA3O95167 84 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 IGKV1-13P0DP09 117 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 SOX6P35712 828 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 LUMP51884 338 aaPredicted RBP12.82□□□□□ -0.36
SRM-204ENST00000475189 C10orf99Q6UWK7 81 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 OR5AP2Q8NGF4 316 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 NOL4LQ96MY1 436 aaPredicted RBP12.82□□□□□ -0.36
SRM-204ENST00000475189 IFT46Q9NQC8 304 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 CEPT1Q9Y6K0 416 aa12.82□□□□□ -0.36
SRM-204ENST00000475189 VWFP04275 2813 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 M0QZ24 198 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 NOL3O60936 208 aaKnown RBP12.81□□□□□ -0.36
SRM-204ENST00000475189 RBBP9O75884 186 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 APOA2P02652 100 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 OR5H8P0DN80 308 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 NAT1P18440 290 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 C5orf64Q2M2E5 130 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 SNX29P2Q8IUI4 249 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 ZNF645Q8N7E2 425 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 GPX8Q8TED1 209 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 RNF5Q99942 180 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 HSPB9Q9BQS6 159 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 MIXL1Q9H2W2 232 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 SLC35D1Q9NTN3 355 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 NECAP2Q9NVZ3 263 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 CCDC59Q9P031 241 aaKnown RBP12.81□□□□□ -0.36
SRM-204ENST00000475189 LINC00527Q9UJ94 153 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 MGAM2Q2M2H8 2515 aa12.81□□□□□ -0.36
SRM-204ENST00000475189 CTDSP2O14595 271 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 IGKV1-16P04430 117 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 AADACP22760 399 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 FCGR2CP31995 323 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 DUTP33316 252 aaKnown RBP12.8□□□□□ -0.36
SRM-204ENST00000475189 THBS3P49746 956 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms