RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 MINOS1-NBL1R4GNA1 71 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 F8P00451 2351 aa8.1□□□□□ -1.11
COL8A1-206ENST00000474648 MTORP42345 2549 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 SAA2-SAA4A0A096LPE2 208 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 LEUTXA8MZ59 168 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 HSD17B6O14756 317 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 RAB29O14966 203 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 NDUFB6O95139 128 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 SAA2P0DJI9 122 aaPredicted RBP8.09□□□□□ -1.11
COL8A1-206ENST00000474648 PAX6P26367 422 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 SAA4P35542 130 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 GPR12P47775 334 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 BPIFB3P59826 476 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 BAMBIQ13145 260 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 SURF2Q15527 256 aaPredicted RBP8.09□□□□□ -1.11
COL8A1-206ENST00000474648 MSMO1Q15800 293 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 TPTE2P1Q5T6R2 138 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 ZNF818PQ6ZRF7 136 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 C9orf139Q6ZV77 190 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 IL17RELQ6ZVW7 336 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 BCL6BQ8N143 479 aaPredicted RBP8.09□□□□□ -1.11
COL8A1-206ENST00000474648 DRAM1Q8N682 238 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 ZNF645Q8N7E2 425 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.09□□□□□ -1.11
COL8A1-206ENST00000474648 BVESQ8NE79 360 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 DUSP18Q8NEJ0 188 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 MALSU1Q96EH3 234 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 AKR1E2Q96JD6 320 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 SLC25A21Q9BQT8 299 aaPredicted RBP8.09□□□□□ -1.11
COL8A1-206ENST00000474648 C5orf66Q9H5L9 145 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 PIPOXQ9P0Z9 390 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 ZNF221Q9UK13 617 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 VSIG4Q9Y279 399 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 TBL2Q9Y4P3 447 aaKnown RBP8.09□□□□□ -1.11
COL8A1-206ENST00000474648 RBM7Q9Y580 266 aaKnown RBP8.09□□□□□ -1.11
COL8A1-206ENST00000474648 MXRA5Q9NR99 2828 aa8.09□□□□□ -1.11
COL8A1-206ENST00000474648 A0A0U1RQK1 487 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 PGLYRP1O75594 196 aaPredicted RBP8.08□□□□□ -1.12
COL8A1-206ENST00000474648 SLC22A5O76082 557 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 CTSDP07339 412 aaPredicted RBP8.08□□□□□ -1.12
COL8A1-206ENST00000474648 CT45A6P0DMU7 189 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 CT45A5P0DMU8 189 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 CT45A7P0DMV0 189 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 PGAM2P15259 253 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 SPNP16150 400 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 PI3P19957 117 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 EPHA1P21709 976 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 IL3RAP26951 378 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 ECI1P42126 302 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 LGALS4P56470 323 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 DEFA1P59665 94 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 DEFA3P59666 94 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 ZNF816Q0VGE8 651 aaPredicted RBP8.08□□□□□ -1.12
COL8A1-206ENST00000474648 MZT2BQ6NZ67 158 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 LPCAT3Q6P1A2 487 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 Q71RC1 249 aaPredicted RBP8.08□□□□□ -1.12
COL8A1-206ENST00000474648 NRARPQ7Z6K4 114 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 SLC38A6Q8IZM9 456 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 ZBTB34Q8NCN2 500 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 ZFAND1Q8TCF1 268 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 ZFAND2BQ8WV99 257 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 RTN4IP1Q8WWV3 396 aaPredicted RBP8.08□□□□□ -1.12
COL8A1-206ENST00000474648 GPHA2Q96T91 129 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 MEGF9Q9H1U4 602 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 FLVCR2Q9UPI3 526 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 AMMECR1Q9Y4X0 333 aaPredicted RBP8.08□□□□□ -1.12
COL8A1-206ENST00000474648 HILPDAQ9Y5L2 63 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 HIVEP2P31629 2446 aa8.08□□□□□ -1.12
COL8A1-206ENST00000474648 FAM240BA0A1B0GVZ2 78 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 A0A1W2PPI3 338 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 M0R1X1 148 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 GPR31O00270 319 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 GAPDHP04406 335 aaKnown RBP8.07□□□□□ -1.12
COL8A1-206ENST00000474648 TCRBP04435 133 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 DUTP33316 252 aaKnown RBP8.07□□□□□ -1.12
COL8A1-206ENST00000474648 REG1BP48304 166 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 BRWD1-AS2P59051 145 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 RND3P61587 244 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 RPL30P62888 115 aaKnown RBP8.07□□□□□ -1.12
COL8A1-206ENST00000474648 RBMS2Q15434 407 aaKnown RBP8.07□□□□□ -1.12
COL8A1-206ENST00000474648 SSX2Q16385 188 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 PHLDA2Q53GA4 152 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 FAM71F2Q6NXP2 309 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 TEX29Q8N6K0 151 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 ZDHHC22Q8N966 263 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 ZNF383Q8NA42 475 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 DRAXINQ8NBI3 349 aaPredicted RBP8.07□□□□□ -1.12
COL8A1-206ENST00000474648 ADAD2Q8NCV1 583 aaKnown RBP8.07□□□□□ -1.12
COL8A1-206ENST00000474648 RBMXL1Q96E39 390 aaKnown RBP8.07□□□□□ -1.12
COL8A1-206ENST00000474648 ZNF486Q96H40 463 aaPredicted RBP8.07□□□□□ -1.12
COL8A1-206ENST00000474648 S1PR3Q99500 378 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 NABP2Q9BQ15 211 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 MRPL20Q9BYC9 149 aaKnown RBP8.07□□□□□ -1.12
COL8A1-206ENST00000474648 DPAGT1Q9H3H5 408 aa8.07□□□□□ -1.12
COL8A1-206ENST00000474648 IGHV1-3A0A0C4DH29 117 aa8.06□□□□□ -1.12
COL8A1-206ENST00000474648 LINC00473A8K010 186 aa8.06□□□□□ -1.12
COL8A1-206ENST00000474648 OOSP1A8MZH6 123 aa8.06□□□□□ -1.12
COL8A1-206ENST00000474648 TNFSF12O43508 249 aa8.06□□□□□ -1.12
COL8A1-206ENST00000474648 CEACAM3P40198 252 aa8.06□□□□□ -1.12
COL8A1-206ENST00000474648 DHODHQ02127 395 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms