RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 IFI27L2Q9H2X8 130 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 SDHAF2Q9NX18 166 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 MGAT4CQ9UBM8 478 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 POLR3KQ9Y2Y1 108 aaPredicted RBP8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 INSIG2Q9Y5U4 225 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 AUP1Q9Y679 476 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 UTP20O75691 2785 aaKnown RBP8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 MALRD1Q5VYJ5 2156 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 A0A1B0GVG6 124 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 C5orf51A6NDU8 294 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 LEUTXA8MZ59 168 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 H7C2Y5 167 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 J3QLI3 93 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 GOSR2O14653 212 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 SLC31A2O15432 143 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 TGFAP01135 160 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 GAPDHP04406 335 aaKnown RBP8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 TRAPPC2P0DI81 140 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 TRAPPC2BP0DI82 140 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 RRASP10301 218 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 RPA2P15927 270 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 HTR1DP28221 377 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 RAB13P51153 203 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 HLA-DRB5Q30154 266 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 OR2B11Q5JQS5 317 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 GPR157Q5UAW9 335 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 TMEM268Q5VZI3 342 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 THOC7Q6I9Y2 204 aaKnown RBP8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 CCDC144NLQ6NUI1 221 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 TEX29Q8N6K0 151 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 ZNF439Q8NDP4 499 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 OR4S2Q8NH73 311 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 LHX4Q969G2 390 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 TMEM230Q96A57 120 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 RRNAD1Q96FB5 475 aaKnown RBP8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 GALNT14Q96FL9 552 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 SPIN2AQ99865 258 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 SPIN2BQ9BPZ2 258 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 AIFM2Q9BRQ8 373 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 C7orf69Q9H7B7 122 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 HIF1ANQ9NWT6 349 aa8.4□□□□□ -1.06
PRPF38A-202ENST00000474048 GCN1Q92616 2671 aaKnown RBP8.4□□□□□ -1.07
PRPF38A-202ENST00000474048 A0A0B4J2A0 478 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 DUXBA0A1W2PPF3 345 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 HMX3A6NHT5 357 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 SMAD7O15105 426 aaKnown RBP8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 CCNKO75909 580 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 TMEM249Q2WGJ8 235 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 SP6Q3SY56 376 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 RPL39P5Q59GN2 51 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 CYB5R2Q6BCY4 276 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 FAM53AQ6NSI3 398 aaPredicted RBP8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 GSG1LQ6UXU4 331 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 LIAT1Q6ZQX7 453 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 PDZD9Q8IXQ8 264 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 SPAG16Q8N0X2 631 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 MITD1Q8WV92 249 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 AGMATQ9BSE5 352 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 TMEM222Q9H0R3 208 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 SIRPDQ9H106 197 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 MMP26Q9NRE1 261 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 COMMD9Q9P000 198 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 SHPKQ9UHJ6 478 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 GAB2Q9UQC2 676 aa8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 TBL2Q9Y4P3 447 aaKnown RBP8.39□□□□□ -1.07
PRPF38A-202ENST00000474048 A0A0B4J293 547 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 C13orf42A0A1B0GVH6 325 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 A0A1W2PRD5 423 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 A0A1W2PRF3 423 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 A0A1W2PRM7 423 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 BUB1B-PAK6H3BSN5 160 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 FCGR3BO75015 233 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 HOXB5P09067 269 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 HOXB4P17483 251 aaPredicted RBP8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 MC5RP33032 325 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 DUTP33316 252 aaKnown RBP8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 UBE2E1P51965 193 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 ZNF134P52741 427 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 CYCSP99999 105 aaKnown RBP8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 ZNF816Q0VGE8 651 aaPredicted RBP8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 KLRD1Q13241 179 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 MINOS1Q5TGZ0 78 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 DHRS7BQ6IAN0 325 aaPredicted RBP8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 ZNF833PQ6ZTB9 187 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 MOB3BQ86TA1 216 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 CADM3Q8N126 398 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 Q8N7P7 452 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 DRAXINQ8NBI3 349 aaPredicted RBP8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 MAPK1IP1LQ8NDC0 245 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 OR11H6Q8NGC7 330 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 ASB13Q8WXK3 278 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 RBPMSQ93062 196 aaKnown RBP8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 IL22RA2Q969J5 263 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 TP53RKQ96S44 253 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 UNKLQ9H9P5 680 aaKnown RBP8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 RAB18Q9NP72 206 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 FAM212BQ9NTI7 297 aaPredicted RBP8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 SLC35D1Q9NTN3 355 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 DPM3Q9P2X0 92 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 MINOS1-NBL1R4GNA1 71 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms