RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 OR5R1Q8NH85 324 aa9.21□□□□□ -0.93
C9orf3-214ENST00000473778 NOL4LQ96MY1 436 aaPredicted RBP9.21□□□□□ -0.93
C9orf3-214ENST00000473778 OR4C12Q96R67 309 aa9.21□□□□□ -0.93
C9orf3-214ENST00000473778 ARRDC1-AS1Q9H2J1 176 aa9.21□□□□□ -0.93
C9orf3-214ENST00000473778 MBNL3Q9NUK0 354 aaKnown RBP9.21□□□□□ -0.93
C9orf3-214ENST00000473778 PTPRBP23467 1997 aa9.21□□□□□ -0.93
C9orf3-214ENST00000473778 DMXL1Q9Y485 3027 aa9.21□□□□□ -0.94
C9orf3-214ENST00000473778 OR5H1A6NKK0 313 aa9.21□□□□□ -0.94
C9orf3-214ENST00000473778 HMGB3O15347 200 aaKnown RBP9.21□□□□□ -0.94
C9orf3-214ENST00000473778 SMPD2O60906 423 aa9.21□□□□□ -0.94
C9orf3-214ENST00000473778 SP1P08047 785 aa9.21□□□□□ -0.94
C9orf3-214ENST00000473778 SOD3P08294 240 aa9.21□□□□□ -0.94
C9orf3-214ENST00000473778 ELLP55199 621 aaPredicted RBP9.21□□□□□ -0.94
C9orf3-214ENST00000473778 RPL30P62888 115 aaKnown RBP9.21□□□□□ -0.94
C9orf3-214ENST00000473778 Q6ZR03 302 aa9.21□□□□□ -0.94
C9orf3-214ENST00000473778 FGFRL1Q8N441 504 aa9.21□□□□□ -0.94
C9orf3-214ENST00000473778 RPP25LQ8N5L8 163 aaKnown RBP9.21□□□□□ -0.94
C9orf3-214ENST00000473778 ABHD5Q8WTS1 349 aa9.21□□□□□ -0.94
C9orf3-214ENST00000473778 ZPBPQ9BS86 351 aa9.21□□□□□ -0.94
C9orf3-214ENST00000473778 OPN3Q9H1Y3 402 aaPredicted RBP9.21□□□□□ -0.94
C9orf3-214ENST00000473778 RNF150Q9ULK6 438 aa9.21□□□□□ -0.94
C9orf3-214ENST00000473778 BDP1A6H8Y1 2624 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 WNT9BO14905 357 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 EREGO14944 169 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 HBE1P02100 147 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 FABP4P15090 132 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 ZNF25P17030 456 aaPredicted RBP9.2□□□□□ -0.94
C9orf3-214ENST00000473778 CXorf67Q86X51 503 aaPredicted RBP9.2□□□□□ -0.94
C9orf3-214ENST00000473778 MCEMP1Q8IX19 187 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 BEND2Q8NDZ0 799 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 OR1L1Q8NH94 360 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 SNIP1Q8TAD8 396 aaKnown RBP9.2□□□□□ -0.94
C9orf3-214ENST00000473778 MBD3L1Q8WWY6 194 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 STRADBQ9C0K7 418 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 WDR61Q9GZS3 305 aaKnown RBP9.2□□□□□ -0.94
C9orf3-214ENST00000473778 RBKSQ9H477 322 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 TMEM9BQ9NQ34 198 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 CISD1Q9NZ45 108 aaKnown RBP9.2□□□□□ -0.94
C9orf3-214ENST00000473778 RBM7Q9Y580 266 aaKnown RBP9.2□□□□□ -0.94
C9orf3-214ENST00000473778 UBE2L5PA0A1B0GUS4 154 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 PHOX2AO14813 284 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 PGA5P0DJD9 388 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 DEFA4P12838 97 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 MDKP21741 143 aaPredicted RBP9.2□□□□□ -0.94
C9orf3-214ENST00000473778 S100GP29377 79 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 MPLP40238 635 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 MDH2P40926 338 aaKnown RBP9.2□□□□□ -0.94
C9orf3-214ENST00000473778 IDH3GP51553 393 aaPredicted RBP9.2□□□□□ -0.94
C9orf3-214ENST00000473778 NKX6-1P78426 367 aaPredicted RBP9.2□□□□□ -0.94
C9orf3-214ENST00000473778 ZNF146Q15072 292 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 ZNF766Q5HY98 468 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 FAM180AQ6UWF9 173 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 ZNF826PQ6ZT77 177 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 OR10G4Q8NGN3 311 aa9.2□□□□□ -0.94
C9orf3-214ENST00000473778 LRP5LA4QPB2 252 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 PTBP3O95758 552 aaKnown RBP9.19□□□□□ -0.94
C9orf3-214ENST00000473778 GRPP07492 148 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 G6PCP35575 357 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 PPP1CBP62140 327 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 RPS16P62249 146 aaKnown RBP9.19□□□□□ -0.94
C9orf3-214ENST00000473778 PMP22Q01453 160 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 PSG7Q13046 419 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 COTL1Q14019 142 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 OR8G2PQ6IF36 304 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 GCNT2Q8N0V5 402 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 SCGB1C1Q8TD33 95 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 DTD1Q8TEA8 209 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 FRZBQ92765 325 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 R3HDM4Q96D70 268 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 PSMG3Q9BT73 122 aaPredicted RBP9.19□□□□□ -0.94
C9orf3-214ENST00000473778 GPR87Q9BY21 358 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 WIPI2Q9Y4P8 454 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 DCHS1Q96JQ0 3298 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 CUL9Q8IWT3 2517 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 LYZL6O75951 148 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 NXPH2O95156 264 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 KRASP01116 189 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 P0C879 139 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 FGF7P21781 194 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 IL2RGP31785 369 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 MPV17P39210 176 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 BPIFB3P59826 476 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 EIF4EBP1Q13541 118 aaPredicted RBP9.19□□□□□ -0.94
C9orf3-214ENST00000473778 SLC10A1Q14973 349 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 WDR25Q64LD2 544 aaPredicted RBP9.19□□□□□ -0.94
C9orf3-214ENST00000473778 ACSM6Q6P461 480 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 TMPRSS7Q7RTY8 843 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 SLC25A40Q8TBP6 338 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 RTL8AQ9BWD3 113 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 SDF2L1Q9HCN8 221 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 LIN7CQ9NUP9 197 aaKnown RBP9.19□□□□□ -0.94
C9orf3-214ENST00000473778 GOLT1BQ9Y3E0 138 aa9.19□□□□□ -0.94
C9orf3-214ENST00000473778 SMCO3A2RU48 225 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 MAP1LC3B2A6NCE7 125 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 C1QTNF9BB2RNN3 333 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 C12orf77C9JDV5 145 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 MLNRO43193 412 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 IGHV1-2P23083 117 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 OR3A1P47881 315 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 ZNF816Q0VGE8 651 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms