RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 GP6Q9HCN6 339 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 TUBG2Q9NRH3 451 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 OCIAD1Q9NX40 245 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 FUT9Q9Y231 359 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 LY96Q9Y6Y9 160 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 MYO7BQ6PIF6 2116 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 G3V3Y1 287 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 WDR1O75083 606 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 KLF7O75840 302 aaPredicted RBP5.18□□□□□ -1.58
HERC4-209ENST00000473533 MYF5P13349 255 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 MPLP40238 635 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 RAB31Q13636 194 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 SSPNQ14714 243 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 WIPI1Q5MNZ9 446 aaPredicted RBP5.18□□□□□ -1.58
HERC4-209ENST00000473533 ZNF664Q8N3J9 261 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 DRAM1Q8N682 238 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 CORO2AQ92828 525 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 POM121L2Q96KW2 1035 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 UHRF2Q96PU4 802 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 VSIRQ9H7M9 311 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 SLC25A22Q9H936 323 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 NAGKQ9UJ70 344 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 ARL2-SNX15V9GYD0 113 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 CEP192Q8TEP8 1941 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 A0A0U1RQK1 487 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 ZNF320A2RRD8 509 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 SLC33A1O00400 549 aaPredicted RBP5.18□□□□□ -1.58
HERC4-209ENST00000473533 SYNGR1O43759 233 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 KITLGP21583 273 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 GFRA1P56159 465 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 DAZAP2Q15038 168 aaPredicted RBP5.18□□□□□ -1.58
HERC4-209ENST00000473533 TMEM183BQ1AE95 376 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 SLC35E4Q6ICL7 350 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 ZNF295-AS1Q8N0V1 137 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 NECAP1Q8NC96 275 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 TMEM37Q8WXS4 190 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 MS4A10Q96PG2 267 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 NPCDR1Q9BY65 106 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 CEP250Q9BV73 2442 aa5.18□□□□□ -1.58
HERC4-209ENST00000473533 MLNRO43193 412 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 PAGE4O60829 102 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 RBMXL2O75526 392 aaKnown RBP5.17□□□□□ -1.58
HERC4-209ENST00000473533 NXPH2O95156 264 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 CXorf1O96002 111 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 IGKV1-39P01597 117 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 MT-ND6P03923 174 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 IGKV1D-39P04432 117 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 KIR2DS2P43631 304 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 TNFSF10P50591 281 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 ARL16Q0P5N6 197 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 ZNF146Q15072 292 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 ZNF585BQ52M93 769 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 Q6P435 159 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 HAPLN4Q86UW8 402 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 FGFBP3Q8TAT2 258 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 KIR2DL5BA0A0G2JN68 375 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 KIR2DL5BA0A0G2JPC4 375 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 CELA2AP08217 269 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 RNF224P0DH78 156 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 NDUFB7P17568 137 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 CDPF1Q6NVV7 123 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 WDR73Q6P4I2 378 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 Q6ZRM9 215 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 KIR2DL5AQ8N109 375 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 CMTM2Q8TAZ6 248 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 ABHD3Q8WU67 409 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 MISP3Q96FF7 219 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 NEU1Q99519 415 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 UBE2ZQ9H832 354 aaPredicted RBP5.17□□□□□ -1.58
HERC4-209ENST00000473533 PXMP4Q9Y6I8 212 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 LY6G6EA0A0G2JKS1 128 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 CER1O95813 267 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 OR2H2O95918 312 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 NGFP01138 241 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 OPRK1P41145 380 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 YPEL3P61236 119 aaPredicted RBP5.17□□□□□ -1.58
HERC4-209ENST00000473533 ERVK-16P61578 105 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 RTL8BQ17RB0 113 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 PDLIM3Q53GG5 364 aaPredicted RBP5.17□□□□□ -1.58
HERC4-209ENST00000473533 DCAF12Q5T6F0 453 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 FAM78BQ5VT40 261 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 ACSM6Q6P461 480 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 TGIF2LXQ8IUE1 241 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 ZNF576Q9H609 170 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 ZNF552Q9H707 407 aaPredicted RBP5.17□□□□□ -1.58
HERC4-209ENST00000473533 OR1A1Q9P1Q5 309 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 WDR83OSQ9Y284 106 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 U3KQA8 63 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 NBEAQ8NFP9 2946 aa5.17□□□□□ -1.58
HERC4-209ENST00000473533 ZNF705FA8MVS1 300 aaPredicted RBP5.16□□□□□ -1.58
HERC4-209ENST00000473533 RPLP1P05386 114 aaKnown RBP5.16□□□□□ -1.58
HERC4-209ENST00000473533 ADH4P08319 380 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 ZNF705DP0CH99 300 aaPredicted RBP5.16□□□□□ -1.58
HERC4-209ENST00000473533 ZNF705BP0CI00 300 aaPredicted RBP5.16□□□□□ -1.58
HERC4-209ENST00000473533 PRSS12P56730 875 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 SOX8P57073 446 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 TGFBR3Q03167 851 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 RSPO4Q2I0M5 234 aaPredicted RBP5.16□□□□□ -1.58
HERC4-209ENST00000473533 ABHD17BQ5VST6 288 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 TMEM144Q7Z5S9 345 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms