RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 CFHR4Q92496 578 aa7.3□□□□□ -1.24
SMC4-214ENST00000472991 ST6GALNAC6Q969X2 333 aa7.3□□□□□ -1.24
SMC4-214ENST00000472991 ABHD1Q96SE0 405 aa7.3□□□□□ -1.24
SMC4-214ENST00000472991 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
SMC4-214ENST00000472991 OR2D2Q9H210 308 aa7.3□□□□□ -1.24
SMC4-214ENST00000472991 SCPEP1Q9HB40 452 aa7.3□□□□□ -1.24
SMC4-214ENST00000472991 RNF150Q9ULK6 438 aa7.3□□□□□ -1.24
SMC4-214ENST00000472991 TCF19Q9Y242 345 aa7.3□□□□□ -1.24
SMC4-214ENST00000472991 A3GALT2U3KPV4 340 aa7.3□□□□□ -1.24
SMC4-214ENST00000472991 IGHV3-72A0A0B4J1Y9 119 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 IGHV1-3A0A0C4DH29 117 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 J3QRK9 145 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 SULT1C2O00338 296 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 PLXNB1O43157 2135 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 TXNL1O43396 289 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 LANCL1O43813 399 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 GPR137BO60478 399 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 TPPPO94811 219 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 NAT1P18440 290 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 NFYAP23511 347 aaPredicted RBP7.29□□□□□ -1.24
SMC4-214ENST00000472991 S100A5P33763 92 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 RCVRNP35243 200 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 DGCR2P98153 550 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 CDK10Q15131 360 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 RPL39P5Q59GN2 51 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 PYHIN1Q6K0P9 492 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 C16orf87Q6PH81 154 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 ZNF833PQ6ZTB9 187 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 TMEM219Q86XT9 240 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 OR5AP2Q8NGF4 316 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 FAM216AQ8WUB2 273 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 C15orf40Q8WUR7 153 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 ZFAND2BQ8WV99 257 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 CAPSLQ8WWF8 208 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 TAF15Q92804 592 aaKnown RBP eCLIP7.29□□□□□ -1.247e-26■■■■□ 25.9
SMC4-214ENST00000472991 AGMATQ9BSE5 352 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 MRPL20Q9BYC9 149 aaKnown RBP7.29□□□□□ -1.24
SMC4-214ENST00000472991 NECAP2Q9NVZ3 263 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 EHFQ9NZC4 300 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 PIPOXQ9P0Z9 390 aa7.29□□□□□ -1.24
SMC4-214ENST00000472991 RBM7Q9Y580 266 aaKnown RBP7.29□□□□□ -1.24
SMC4-214ENST00000472991 A6NDX4 124 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 FABP12A6NFH5 140 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 GABARAPH6UMI1 98 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 RAB29O14966 203 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 CHST1O43916 411 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 IGKV1D-33P01593 117 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 IGKV1-33P01594 117 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 PMP2P02689 132 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 SNRNP70P08621 437 aaKnown RBP7.28□□□□□ -1.24
SMC4-214ENST00000472991 OR8U9P0C7N5 309 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 OR5H8P0DN80 308 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 HLA-DMAP28067 261 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 GPR12P47775 334 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 TAS2R46P59540 309 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 ACTBP60709 375 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 ACTG1P63261 375 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 MRPS10P82664 201 aaKnown RBP7.28□□□□□ -1.24
SMC4-214ENST00000472991 LSAMPQ13449 338 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 HES1Q14469 280 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 DHRS7BQ6IAN0 325 aaPredicted RBP7.28□□□□□ -1.24
SMC4-214ENST00000472991 FAM71F2Q6NXP2 309 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 FAM131AQ6UXB0 335 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 CCBE1Q6UXH8 406 aaPredicted RBP7.28□□□□□ -1.24
SMC4-214ENST00000472991 LCNL1Q6ZST4 164 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 CCDC190Q86UF4 302 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 OR5H2Q8NGV7 314 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 OR8U1Q8NH10 309 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 SMIM4Q8WVI0 70 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 RBMXL1Q96E39 390 aaKnown RBP7.28□□□□□ -1.24
SMC4-214ENST00000472991 C5orf30Q96GV9 206 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 S1PR3Q99500 378 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 ZNF251Q9BRH9 671 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 RABL2AQ9UBK7 228 aaPredicted RBP7.28□□□□□ -1.24
SMC4-214ENST00000472991 KLK11Q9UBX7 282 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 ZNF221Q9UK13 617 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 PITPNC1Q9UKF7 332 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 RABL2BQ9UNT1 228 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 OR2W1Q9Y3N9 320 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 V9GYH0 126 aa7.28□□□□□ -1.24
SMC4-214ENST00000472991 COL6A5A8TX70 2615 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 IGKV1D-13A0A0B4J2D9 117 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 FAM90A9PA6NNJ1 464 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 RNF212BA8MTL3 300 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 ZNF736B4DX44 427 aaPredicted RBP7.27□□□□□ -1.25
SMC4-214ENST00000472991 RBBP9O75884 186 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 TUSC2O75896 110 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 PF4P02776 101 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 IGKV1-13P0DP09 117 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 AADACP22760 399 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 FCGR2CP31995 323 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 HRH1P35367 487 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 RFX2P48378 723 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 LUMP51884 338 aaPredicted RBP7.27□□□□□ -1.25
SMC4-214ENST00000472991 HABP2Q14520 560 aaPredicted RBP7.27□□□□□ -1.25
SMC4-214ENST00000472991 CNPY1Q3B7I2 92 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 GLDNQ6ZMI3 551 aaPredicted RBP7.27□□□□□ -1.25
SMC4-214ENST00000472991 OVCH2Q7RTZ1 564 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 LYSMD2Q8IV50 215 aa7.27□□□□□ -1.25
SMC4-214ENST00000472991 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms