RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 IFI27L2Q9H2X8 130 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 OR2F2O95006 317 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 CCL3L1P16619 93 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 EIF4EBP1Q13541 118 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-206ENST00000472815 OR2F1Q13607 317 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 ZNF345Q14585 488 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 LGALSLQ3ZCW2 172 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-206ENST00000472815 SPAG16Q8N0X2 631 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 C8orf31Q8N9H6 132 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 C8orf46Q8TAG6 207 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 PSMG3-AS1Q96PY0 264 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 BARX1Q9HBU1 254 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-206ENST00000472815 MBD2Q9UBB5 411 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 LRBAP50851 2863 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 FCN3O75636 299 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 S100A11P31949 105 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 PDLIM4P50479 330 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 IL15RAQ13261 267 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 RAB32Q13637 225 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 CT45A1Q5HYN5 189 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 FAM53AQ6NSI3 398 aaPredicted RBP12.02□□□□□ -0.49
HIF3A-206ENST00000472815 BTNL3Q6UXE8 466 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 FAM219AQ8IW50 185 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 LYG1Q8N1E2 194 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 ZNF439Q8NDP4 499 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 CT45A3Q8NHU0 189 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 DCUN1D4Q92564 292 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 PLSCR3Q9NRY6 295 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 TNFSF18Q9UNG2 199 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 BOLA1Q9Y3E2 137 aa12.02□□□□□ -0.49
HIF3A-206ENST00000472815 PPIAL4CA0A0B4J2A2 164 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 A0A1B0GU03 582 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 M0R1X1 148 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 ST8SIA3O43173 380 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 SCGB1D2O95969 90 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 LIPFP07098 398 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 PPIAL4GP0DN37 164 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 DUTP33316 252 aaKnown RBP12.01□□□□□ -0.49
HIF3A-206ENST00000472815 GNG10P50151 68 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 ZNF134P52741 427 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 SP5Q6BEB4 398 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-206ENST00000472815 ACOT7LQ6ZUV0 252 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 SSBP3Q9BWW4 388 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-206ENST00000472815 PAIP2BQ9ULR5 123 aaKnown RBP12.01□□□□□ -0.49
HIF3A-206ENST00000472815 SESN1Q9Y6P5 492 aa12.01□□□□□ -0.49
HIF3A-206ENST00000472815 SAA2-SAA4A0A096LPE2 208 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 C17orf98A8MV24 154 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 F5H0A9 414 aaPredicted RBP12□□□□□ -0.49
HIF3A-206ENST00000472815 RBFOX2O43251 390 aaKnown RBP eCLIP12□□□□□ -0.49
HIF3A-206ENST00000472815 TSC22D2O75157 780 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 IGHV3-7P01780 117 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 SAA2P0DJI9 122 aaPredicted RBP12□□□□□ -0.49
HIF3A-206ENST00000472815 IGHV1-8P0DP01 117 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 LYL1P12980 280 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 PVALBP20472 110 aaPredicted RBP12□□□□□ -0.49
HIF3A-206ENST00000472815 IL3RAP26951 378 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 LPAR6P43657 344 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 THBS3P49746 956 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 LINC00311Q8N616 119 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 OR9G1Q8NH87 305 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 TNFRSF14Q92956 283 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 LEAP2Q969E1 77 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 ARL6Q9H0F7 186 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 CRYBG3Q68DQ2 2970 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 A0A087X0M5 115 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 A0A1B0GX30 115 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 DEDDO75618 318 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 MMP23AO75900 390 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 NKX2-1P43699 371 aaPredicted RBP12□□□□□ -0.49
HIF3A-206ENST00000472815 DLX6P56179 175 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 ZNF585BQ52M93 769 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 FAM71F2Q6NXP2 309 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 TMUB2Q71RG4 321 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 FOXRED2Q8IWF2 684 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 OR10X1Q8NGY0 326 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 IGFBPL1Q8WX77 278 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 C5orf30Q96GV9 206 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 TMEM133Q9H2Q1 129 aa12□□□□□ -0.49
HIF3A-206ENST00000472815 LSM5Q9Y4Y9 91 aaKnown RBP12□□□□□ -0.49
HIF3A-206ENST00000472815 USF3Q68DE3 2245 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 KANTRA0A1W2PQU2 76 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 E5RGE8 158 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 NDUFS8O00217 210 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 WRBO00258 174 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 TOR1AO14656 332 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 RGS13O14921 159 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 SLC31A2O15432 143 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 NDUFS7O75251 213 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 HPRT1P00492 218 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 CXCL2P19875 107 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 SSTR2P30874 369 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 RPL30P62888 115 aaKnown RBP11.99□□□□□ -0.49
HIF3A-206ENST00000472815 TAGLNQ01995 201 aaKnown RBP11.99□□□□□ -0.49
HIF3A-206ENST00000472815 OPCMLQ14982 345 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 OR4D5Q8NGN0 318 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 OR4S2Q8NH73 311 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 OR1S1Q8NH92 325 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 TMEM186Q96B77 213 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 PLEKHA2Q9HB19 425 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms