RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 ATP5G1P05496 136 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 MIPP30301 263 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 UBE2G2P60604 165 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 HPCAP84074 193 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 AMTNQ6UX39 209 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 PLEKHG7Q6ZR37 379 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 CD302Q8IX05 232 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 OR10D3Q8NH80 312 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 Q8WTZ3 238 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 OR52B2Q96RD2 323 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 TIPINQ9BVW5 301 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 PECRQ9BY49 303 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 UPF3BQ9BZI7 483 aaKnown RBP1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 OR51B6Q9H340 312 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 PUS1Q9Y606 427 aaKnown RBP eCLIP1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 DOCK6Q96HP0 2047 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 ADGRB3O60242 1522 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 TMEM235A6NFC5 223 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 ATP8B1O43520 1251 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 HPGDSO60760 199 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 HIST1H1CP16403 213 aaKnown RBP1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 ALOX5APP20292 161 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 CRYBB3P26998 211 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 SERPINB10P48595 397 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 CDK9P50750 372 aaKnown RBP1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 HES1Q14469 280 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 PCOTHQ58A44 107 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 PDPK2PQ6A1A2 396 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 DNM1P34Q6PK57 102 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 C2orf91Q6ZV80 131 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 GLT6D1Q7Z4J2 308 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 OR4X1Q8NH49 305 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 SLC37A2Q8TED4 501 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 DNAJB3Q8WWF6 145 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 FGF13Q92913 245 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 MRPS24Q96EL2 167 aaKnown RBP1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 MIEN1Q9BRT3 115 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 NKX6-2Q9C056 277 aaPredicted RBP1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 SLC22A4Q9H015 551 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 SPANXB1Q9NS25 103 aaPredicted RBP1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 EMC3Q9P0I2 261 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 VWDEQ8N2E2 1590 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 CACNA1SQ13698 1873 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 RAD50Q92878 1312 aa1.88□□□□□ -2.11
PRPF40A-208ENST00000472760 C11orf86A6NJI1 115 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 OR11H12B2RN74 326 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 CCL3P10147 92 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 CXCL3P19876 107 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 CD40LGP29965 261 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 HINT1P49773 126 aaPredicted RBP1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 BTN3A2P78410 334 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 DRAM2Q6UX65 266 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 BAP18Q8IXM2 172 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 SLC35F6Q8N357 371 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 OR11H2Q8NH07 326 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 NSRP1Q9H0G5 558 aaKnown RBP1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 SLC2A9Q9NRM0 540 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 NDUFB11Q9NX14 153 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 EURLQ9NYK6 297 aa1.87□□□□□ -2.11
PRPF40A-208ENST00000472760 ADAMTS7Q9UKP4 1686 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 A0A1W2PP64 1363 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 OR5K4A6NMS3 321 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 YEATS4O95619 227 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 CXCL2P19875 107 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 CD79BP40259 229 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 GNA13Q14344 377 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 AGTRAPQ6RW13 159 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 MS4A6EQ96DS6 147 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 Q9BRP9 147 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 MS4A6AQ9H2W1 248 aa1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 COL5A3P25940 1745 aaPredicted RBP1.86□□□□□ -2.11
PRPF40A-208ENST00000472760 PIK3R4Q99570 1358 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 TEX50A0A1B0GTY4 177 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 TINCRA0A1B0GVN0 87 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 M0R381 172 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 GNRH2O43555 120 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 IGHV1-69P01742 117 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 IL6P05231 212 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 UGT2B7P16662 529 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 IFNGR2P38484 337 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 TMEM33P57088 247 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 DMTNQ08495 405 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 EBPQ15125 230 aaKnown RBP1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 FAM19A5Q7Z5A7 132 aaPredicted RBP1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 C1orf174Q8IYL3 243 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 LRRC34Q8IZ02 419 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 FAM9CQ8IZT9 166 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 ZNF283Q8N7M2 679 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 CNEP1R1Q8N9A8 125 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 OR4X2Q8NGF9 303 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 RPS4Y2Q8TD47 263 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 DCANP1Q8TF63 244 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 ASB13Q8WXK3 278 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 CPNE2Q96FN4 548 aaPredicted RBP1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 PACRGQ96M98 296 aaPredicted RBP1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 DHRS9Q9BPW9 319 aa1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 ZNF471Q9BX82 626 aaPredicted RBP1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 PCYT1BQ9Y5K3 369 aaPredicted RBP1.85□□□□□ -2.11
PRPF40A-208ENST00000472760 FBN1P35555 2871 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms