RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 TAGLNQ01995 201 aaKnown RBP11.32□□□□□ -0.6
BRCA1-211ENST00000472490 Q8N6K4 173 aa11.32□□□□□ -0.6
BRCA1-211ENST00000472490 GVQW1Q8N7I0 195 aa11.32□□□□□ -0.6
BRCA1-211ENST00000472490 C5orf56Q8N8D9 126 aa11.32□□□□□ -0.6
BRCA1-211ENST00000472490 SGMS2Q8NHU3 365 aa11.32□□□□□ -0.6
BRCA1-211ENST00000472490 RASL11BQ9BPW5 248 aa11.32□□□□□ -0.6
BRCA1-211ENST00000472490 SCPEP1Q9HB40 452 aa11.32□□□□□ -0.6
BRCA1-211ENST00000472490 LIN7CQ9NUP9 197 aaKnown RBP11.32□□□□□ -0.6
BRCA1-211ENST00000472490 WASHC3Q9Y3C0 194 aa11.32□□□□□ -0.6
BRCA1-211ENST00000472490 COL6A5A8TX70 2615 aa11.32□□□□□ -0.6
BRCA1-211ENST00000472490 ZNF736B4DX44 427 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-211ENST00000472490 H7C2Y5 167 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 SULT1C2O00338 296 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 RBBP9O75884 186 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 HLA-DQB1P01920 261 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 APOA2P02652 100 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 CT45A6P0DMU7 189 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 CT45A5P0DMU8 189 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 CT45A7P0DMV0 189 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 VSIG10L2P0DP72 767 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 TAS2R46P59540 309 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 CBX3Q13185 183 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 MMDQ15546 238 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 C9orf152Q5JTZ5 239 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 OR5AP2Q8NGF4 316 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 OR5AN1Q8NGI8 311 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 DYNC2LI1Q8TCX1 351 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 RNF5Q99942 180 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 CITED1Q99966 193 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 SERTAD4Q9NUC0 356 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 EXTL2Q9UBQ6 330 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 SIGLEC9Q9Y336 463 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 CEPT1Q9Y6K0 416 aa11.31□□□□□ -0.6
BRCA1-211ENST00000472490 H0YJW9 148 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 ZNF701M0R085 212 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-211ENST00000472490 M0R1X1 148 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 AMY1AP04745 511 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 AMY2AP04746 511 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 OR5H8P0DN80 308 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 PTHLHP12272 177 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 NFYAP23511 347 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-211ENST00000472490 FBLN7Q53RD9 439 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 FAM131AQ6UXB0 335 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 PDPNQ86YL7 162 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 SNX29P2Q8IUI4 249 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 KLHDC1Q8N7A1 406 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 ZNF645Q8N7E2 425 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 ADTRPQ96IZ2 230 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 SDHAF2Q9NX18 166 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 KIAA1456Q9P272 454 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 RABL2AQ9UBK7 228 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-211ENST00000472490 RSL24D1Q9UHA3 163 aaKnown RBP11.3□□□□□ -0.6
BRCA1-211ENST00000472490 RABL2BQ9UNT1 228 aa11.3□□□□□ -0.6
BRCA1-211ENST00000472490 MEIS3P1A6NDR6 274 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 KCNAB3O43448 404 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 THBS3P49746 956 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 ACTBP60709 375 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 CDK10Q15131 360 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 CENPVQ7Z7K6 275 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-211ENST00000472490 FOXRED2Q8IWF2 684 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 Q8N9W7 124 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 DRAXINQ8NBI3 349 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-211ENST00000472490 GPX8Q8TED1 209 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 SNAPC3Q92966 411 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 GON7Q9BXV9 100 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 WNT10AQ9GZT5 417 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 ANAPC10Q9UM13 185 aa11.29□□□□□ -0.6
BRCA1-211ENST00000472490 NBR2O15453 112 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 PROP1O75360 226 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 TUSC2O75896 110 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 RRASP10301 218 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 NAT1P18440 290 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 FCGR2CP31995 323 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 RCVRNP35243 200 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 F2RL1P55085 397 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 MRPS10P82664 201 aaKnown RBP11.28□□□□□ -0.6
BRCA1-211ENST00000472490 RTL8BQ17RB0 113 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 GLDNQ6ZMI3 551 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-211ENST00000472490 Q6ZS46 218 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 SLC35E3Q7Z769 313 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 FAM71E2Q8N5Q1 922 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 OR5H2Q8NGV7 314 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 GIMAP1Q8WWP7 306 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 BORCS5Q969J3 196 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 FLYWCH2Q96CP2 140 aaKnown RBP11.28□□□□□ -0.6
BRCA1-211ENST00000472490 C6orf62Q9GZU0 229 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-211ENST00000472490 PLSCR3Q9NRY6 295 aa11.28□□□□□ -0.6
BRCA1-211ENST00000472490 M0QZ24 198 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 PPYP01298 95 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 IGHG2P01859 326 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 FCER2P06734 321 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 MSMO1Q15800 293 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 OVCH2Q7RTZ1 564 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 LAX1Q8IWV1 398 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 ZNF383Q8NA42 475 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 NPBQ8NG41 125 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 CHPT1Q8WUD6 406 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 FCAMRQ8WWV6 532 aa11.27□□□□□ -0.61
BRCA1-211ENST00000472490 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.61
BRCA1-211ENST00000472490 SLIRPQ9GZT3 109 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms