RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ZNF645Q8N7E2 425 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 POC5Q8NA72 575 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 LHFPL5Q8TAF8 219 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 CAPSLQ8WWF8 208 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 MRPL20Q9BYC9 149 aaKnown RBP7.95□□□□□ -1.14
SF3A1-207ENST00000471342 ALX4Q9H161 411 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-207ENST00000471342 OR2D2Q9H210 308 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 HEXA-AS1Q9H8Q6 139 aa7.95□□□□□ -1.14
SF3A1-207ENST00000471342 CRYM-AS1A6NIL9 109 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 VGLL3A8MV65 326 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 DISC1C4P0D8 188 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 H0YJW9 148 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 ANXA7P20073 488 aaKnown RBP7.94□□□□□ -1.14
SF3A1-207ENST00000471342 LUMP51884 338 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-207ENST00000471342 FXYD4P59646 89 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 AP3S2P59780 193 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 SSBP2P81877 361 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-207ENST00000471342 C2orf68Q2NKX9 166 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 MIDNQ504T8 468 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 MINOS1Q5TGZ0 78 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 Q6ZNX1 250 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 ZDHHC22Q8N966 263 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 DRAXINQ8NBI3 349 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-207ENST00000471342 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-207ENST00000471342 GLYATL2Q8WU03 294 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 RTN4IP1Q8WWV3 396 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-207ENST00000471342 TP53RKQ96S44 253 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 PRRT1Q99946 306 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 SLC25A21Q9BQT8 299 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-207ENST00000471342 SLC5A7Q9GZV3 580 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 PLSCR3Q9NRY6 295 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 PRR13Q9NZ81 148 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 DPM3Q9P2X0 92 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 MINOS1-NBL1R4GNA1 71 aa7.94□□□□□ -1.14
SF3A1-207ENST00000471342 NSD1Q96L73 2696 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-207ENST00000471342 MTORP42345 2549 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 A0A0G2JRQ6 117 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 A0A1W2PPH5 198 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 A8MV72 311 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-207ENST00000471342 HSD17B6O14756 317 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 RAB29O14966 203 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 MPPED1O15442 326 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 RAMP3O60896 148 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 PTTG1O95997 202 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 IGLV2-23P01705 113 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 IGKV1-16P04430 117 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 AMY1AP04745 511 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 ARG1P05089 322 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 CRYGBP07316 175 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 REG1BP48304 166 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 TMEM187Q14656 261 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 RBMS2Q15434 407 aaKnown RBP7.93□□□□□ -1.14
SF3A1-207ENST00000471342 ANKRD55Q3KP44 614 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 SCGB2B2Q4G0G5 96 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 FAM71F2Q6NXP2 309 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 GLDNQ6ZMI3 551 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-207ENST00000471342 LYG1Q8N1E2 194 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 CENPSQ8N2Z9 138 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 OR13D1Q8NGV5 346 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 SECTM1Q8WVN6 248 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 TOMM40LQ969M1 308 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 GALNT14Q96FL9 552 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 AKR1E2Q96JD6 320 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 GINS4Q9BRT9 223 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 C20orf85Q9H1P6 137 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 GHITMQ9H3K2 345 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 SLC2A9Q9NRM0 540 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 MCUBQ9NWR8 336 aa7.93□□□□□ -1.14
SF3A1-207ENST00000471342 IGHV1-3A0A0C4DH29 117 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 A0A1B0GVG6 124 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 C7orf66A4D0T2 115 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 DBX1A6NMT0 343 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 GPR31O00270 319 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 ARPC1BO15143 372 aaKnown RBP7.92□□□□□ -1.14
SF3A1-207ENST00000471342 HSPA12AO43301 675 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 TNFSF12O43508 249 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 F2RP25116 425 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 HTR1DP28221 377 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 RAB7AP51149 207 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 RAB13P51153 203 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 DYNLT3P51808 116 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 RAG2P55895 527 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 TSPAN5P62079 268 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 PPP1R1AQ13522 171 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 DEFB112Q30KQ8 113 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 SP6Q3SY56 376 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 PHLDA2Q53GA4 152 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 C16orf87Q6PH81 154 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 TBC1D26Q86UD7 250 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 TMEM17Q86X19 198 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 SLC38A6Q8IZM9 456 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 OR2AK2Q8NG84 335 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 OR52B4Q8NGK2 314 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 EDARADDQ8WWZ3 215 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 MALSU1Q96EH3 234 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 WDR89Q96FK6 387 aaPredicted RBP7.92□□□□□ -1.14
SF3A1-207ENST00000471342 ESM1Q9NQ30 184 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 NUDT15Q9NV35 164 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 PIPOXQ9P0Z9 390 aa7.92□□□□□ -1.14
SF3A1-207ENST00000471342 NUP50Q9UKX7 468 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms