RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SUPT3HB4E1H0 165 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 SEC14L6B5MCN3 397 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 J3QQQ9 107 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 TOR1AO14656 332 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 PIN1P1O15428 100 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 DENRO43583 198 aaKnown RBP0.14□□□□□ -2.39
UBXN4-207ENST00000471246 NQO1P15559 274 aaKnown RBP0.14□□□□□ -2.39
UBXN4-207ENST00000471246 PRKACAP17612 351 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 SPRR2EP22531 72 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 SPRR2DP22532 72 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 IVDP26440 423 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 SPRR2BP35325 72 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 SPRR2AP35326 72 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 CCT6AP40227 531 aaKnown RBP0.14□□□□□ -2.39
UBXN4-207ENST00000471246 LPAR6P43657 344 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 RAB25P57735 213 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 RPL26P61254 145 aaKnown RBP0.14□□□□□ -2.39
UBXN4-207ENST00000471246 IFFO1Q0D2I5 559 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 TSPAN31Q12999 210 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 SKP2Q13309 424 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 DYNC1I2Q13409 638 aaKnown RBP0.14□□□□□ -2.39
UBXN4-207ENST00000471246 RAB11BQ15907 218 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 ZBTB6Q15916 424 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 NDUFAF6Q330K2 333 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 DUPD1Q68J44 220 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 SSX7Q7RTT5 188 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 C10orf107Q8IVU9 208 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 CA13Q8N1Q1 262 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 ZIC4Q8N9L1 334 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 GATD1Q8NB37 220 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 OR51Q1Q8NH59 317 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 SPACA4Q8TDM5 124 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 C16orf78Q8WTQ4 265 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 PDCD6IPQ8WUM4 868 aaKnown RBP0.14□□□□□ -2.39
UBXN4-207ENST00000471246 CLDN23Q96B33 292 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 GLT1D1Q96MS3 346 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 MBOAT7Q96N66 472 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 TAPBPLQ9BX59 468 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 PECRQ9BY49 303 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 BCL2L14Q9BZR8 327 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 TRIM4Q9C037 500 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 IL22Q9GZX6 179 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 ALX4Q9H161 411 aaPredicted RBP0.14□□□□□ -2.39
UBXN4-207ENST00000471246 CLSTN2Q9H4D0 955 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 SMDT1Q9H4I9 107 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 RPL26L1Q9UNX3 145 aaKnown RBP0.14□□□□□ -2.39
UBXN4-207ENST00000471246 WASHC3Q9Y3C0 194 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 MTCH2Q9Y6C9 303 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 MED12LQ86YW9 2145 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 SYNMO15061 1565 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 HEATR5BQ9P2D3 2071 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 MAGI3Q5TCQ9 1506 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 PEAK1Q9H792 1746 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 TET1Q8NFU7 2136 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 TNCP24821 2201 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 IGHV2-26A0A0B4J1V2 119 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 IGHV3-73A0A0B4J1V6 119 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 IGKV1-12A0A0C4DH73 117 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 A0A1B0GVG6 124 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 SERTM2A0A1B0GWG4 89 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 A8MUN3 132 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 GATCO43716 136 aaKnown RBP0.13□□□□□ -2.39
UBXN4-207ENST00000471246 SOD1P00441 154 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 CA2P00918 260 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 LTAP01374 205 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 IGKV1D-12P01611 117 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 OR4A8P0C604 315 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 LIPCP11150 499 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 ANXA8P13928 327 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 HINT1P49773 126 aaPredicted RBP0.13□□□□□ -2.39
UBXN4-207ENST00000471246 TAL2Q16559 108 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 HES3Q5TGS1 186 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 ANXA8L1Q5VT79 327 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 Q6ZTI0 123 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 CCDC121Q6ZUS5 278 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 C2orf91Q6ZV80 131 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 ATPAF2Q8N5M1 289 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 TRIML2Q8N7C3 387 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 DRAXINQ8NBI3 349 aaPredicted RBP0.13□□□□□ -2.39
UBXN4-207ENST00000471246 OR5T3Q8NGG3 340 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 CLHC1Q8NHS4 586 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 SPPL2BQ8TCT7 592 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 CASTOR1Q8WTX7 329 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 GTF2H4Q92759 462 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 MRPS24Q96EL2 167 aaKnown RBP0.13□□□□□ -2.39
UBXN4-207ENST00000471246 CENPNQ96H22 339 aaPredicted RBP0.13□□□□□ -2.39
UBXN4-207ENST00000471246 BIRC8Q96P09 236 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 BEX2Q9BXY8 128 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 POTEKPQ9BYX7 375 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 NXF2Q9GZY0 626 aaKnown RBP0.13□□□□□ -2.39
UBXN4-207ENST00000471246 C16orf95Q9H693 158 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 XKR8Q9H6D3 395 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 BABAM2Q9NXR7 383 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 ANGPT4Q9Y264 503 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 RHBDD3Q9Y3P4 386 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 USH1CQ9Y6N9 552 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 KIF24Q5T7B8 1368 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 ATP10BO94823 1461 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 PZPP20742 1482 aa0.13□□□□□ -2.39
UBXN4-207ENST00000471246 NUP153P49790 1475 aaKnown RBP0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms