RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CDC26Q8NHZ8 85 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 PHOSPHO2Q8TCD6 241 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 TMBIM1Q969X1 311 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 CCDC42Q96M95 316 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 C1QTNF6Q9BXI9 259 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 MED28Q9H204 178 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 ASF1BQ9NVP2 202 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 POLR1DQ9Y2S0 133 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 CARHSP1Q9Y2V2 147 aaKnown RBP1.8□□□□□ -2.12
BRCA2-202ENST00000470094 WASHC3Q9Y3C0 194 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 FIS1Q9Y3D6 152 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 CEP170Q5SW79 1584 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 NAV1Q8NEY1 1877 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 YLPM1P49750 1951 aaKnown RBP1.79□□□□□ -2.12
BRCA2-202ENST00000470094 TRAV8-1A0A0A6YYK1 113 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 A0A1B0GU33 70 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 GGTLC3B5MD39 225 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 KPNA3O00505 521 aaPredicted RBP1.79□□□□□ -2.12
BRCA2-202ENST00000470094 MRASO14807 208 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 SLC25A20O43772 301 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 LYPLA2O95372 231 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 IGLV3-27P01718 113 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 OPN1SWP03999 348 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 RPS17P08708 135 aaKnown RBP1.79□□□□□ -2.12
BRCA2-202ENST00000470094 OR4A8P0C604 315 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 OR12D1P0DN82 309 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 RPS12P25398 132 aaKnown RBP1.79□□□□□ -2.12
BRCA2-202ENST00000470094 HSD11B1P28845 292 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 DDTP30046 118 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 PPP1CCP36873 323 aaKnown RBP1.79□□□□□ -2.12
BRCA2-202ENST00000470094 RAB5BP61020 215 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 RANP62826 216 aaKnown RBP1.79□□□□□ -2.12
BRCA2-202ENST00000470094 RPS24P62847 133 aaKnown RBP1.79□□□□□ -2.12
BRCA2-202ENST00000470094 HERVK_113P63121 156 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 BAMBIQ13145 260 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 JOSD1Q15040 202 aaPredicted RBP1.79□□□□□ -2.12
BRCA2-202ENST00000470094 PYCR3Q53H96 274 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 ACSBG2Q5FVE4 666 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 CLVS2Q5SYC1 327 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 NAA40Q86UY6 237 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 C1orf158Q8N1D5 194 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 EIF4E3Q8N5X7 224 aaKnown RBP1.79□□□□□ -2.12
BRCA2-202ENST00000470094 TMEM161BQ8NDZ6 487 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 OR2V1Q8NHB1 315 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 JOSD2Q8TAC2 188 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 MED18Q9BUE0 208 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 C9orf16Q9BUW7 83 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 ABCG5Q9H222 651 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 DUSP21Q9H596 190 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 HES4Q9HCC6 221 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 ZNF391Q9UJN7 358 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 MRPS16Q9Y3D3 137 aaKnown RBP1.79□□□□□ -2.12
BRCA2-202ENST00000470094 HDGFL3Q9Y3E1 203 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 EVC2Q86UK5 1308 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 NCOA1Q15788 1441 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 CAMSAP1Q5T5Y3 1602 aa1.79□□□□□ -2.12
BRCA2-202ENST00000470094 TICRRQ7Z2Z1 1910 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 THSD7AQ9UPZ6 1657 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 NID2Q14112 1375 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 ZBED9Q6R2W3 1325 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 DEDDO75618 318 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 CPSF4O95639 269 aaKnown RBP1.78□□□□□ -2.12
BRCA2-202ENST00000470094 IL6P05231 212 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 CRABP1P29762 137 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 CAPZBP47756 277 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 OMPP47874 163 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 DAPP51397 102 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 AKR1C2P52895 323 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 SNAP25P60880 206 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 FGF12P61328 243 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 NAA20P61599 178 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 SLC35A2P78381 396 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 BASP1P80723 227 aaKnown RBP1.78□□□□□ -2.12
BRCA2-202ENST00000470094 AESQ08117 197 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 SRSF6Q13247 344 aaKnown RBP1.78□□□□□ -2.12
BRCA2-202ENST00000470094 WDR59Q6PJI9 974 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 COMMD7Q86VX2 200 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 TRAPPC5Q8IUR0 188 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 Q8NAQ8 132 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 OR5B17Q8NGF7 314 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 CD200R1Q8TD46 325 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 TMA16Q96EY4 203 aaKnown RBP1.78□□□□□ -2.12
BRCA2-202ENST00000470094 IMP4Q96G21 291 aaKnown RBP1.78□□□□□ -2.12
BRCA2-202ENST00000470094 TLNRD1Q9H1K6 362 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 XPNPEP1Q9NQW7 623 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 DKKL1Q9UK85 242 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 DNAJC12Q9UKB3 198 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 ALG5Q9Y673 324 aa1.78□□□□□ -2.12
BRCA2-202ENST00000470094 SCN4AP35499 1836 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 ZFYVE9O95405 1425 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 FLT4P35916 1363 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 C5orf49A4QMS7 147 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 FADS1O60427 444 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 KRT75O95678 551 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 REG1AP05451 166 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 IGHV3-30-3P0DP02 117 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 ALOX5APP20292 161 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 OPRM1P35372 400 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 SULT1A1P50225 295 aa1.77□□□□□ -2.13
BRCA2-202ENST00000470094 MRPS25P82663 173 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms