RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 ZNF705BP0CI00 300 aaPredicted RBP11.78□□□□□ -0.52
GPC1-208ENST00000469694 MCEMP1Q8IX19 187 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 OR2T10Q8NGZ9 312 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 PLPPR1Q8TBJ4 325 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 TMEM45BQ96B21 275 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 APH1AQ96BI3 265 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 C20orf144Q9BQM9 153 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 RSG1Q9BU20 258 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 OR6C6A6NF89 314 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 KBTBD11O94819 623 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 ZNF92Q03936 586 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 ACSF3Q4G176 576 aaPredicted RBP11.78□□□□□ -0.52
GPC1-208ENST00000469694 SLC25A24Q6NUK1 477 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 MS4A10Q96PG2 267 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 ZDHHC11Q9H8X9 412 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 ZNF286AQ9HBT8 521 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 RNF115Q9Y4L5 304 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 ACACAQ13085 2346 aa11.78□□□□□ -0.52
GPC1-208ENST00000469694 A0A0U1RQV5 110 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 MAP1LC3B2A6NCE7 125 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 PPYP01298 95 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 GNRHRP30968 328 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 OR5I1Q13606 314 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 RTP5Q14D33 572 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 NMSQ5H8A3 153 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 FBXW9Q5XUX1 488 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 IMMP2LQ96T52 175 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 OR2J1Q9GZK6 312 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 MAP1LC3BQ9GZQ8 125 aa11.77□□□□□ -0.52
GPC1-208ENST00000469694 TNRC6AQ8NDV7 1962 aaKnown RBP11.77□□□□□ -0.52
GPC1-208ENST00000469694 SIAH2O43255 324 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 TNFSF13O75888 250 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 NXPH3O95157 252 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 IFNA1P01562 189 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 TBC1D26Q86UD7 250 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 NEK7Q8TDX7 302 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 ZCCHC14Q8WYQ9 949 aaKnown RBP11.77□□□□□ -0.53
GPC1-208ENST00000469694 OR51I2Q9H344 312 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 RNF150Q9ULK6 438 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 BSNQ9UPA5 3926 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 ZNF737O75373 536 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 TMEM256Q8N2U0 113 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 ANAPC16Q96DE5 110 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 SDSLQ96GA7 329 aa11.77□□□□□ -0.53
GPC1-208ENST00000469694 SLC22A20A6NK97 555 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 TCF21O43680 179 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 VDAC1P21796 283 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 COTL1Q14019 142 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 KIAA2026Q5HYC2 2103 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 KLK10O43240 276 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 NUPR1O60356 82 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 YPEL1O60688 119 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 TDRG1Q3Y452 100 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 SCGB1C1Q8TD33 95 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 YPEL2Q96QA6 119 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 ZFP30Q9Y2G7 519 aa11.76□□□□□ -0.53
GPC1-208ENST00000469694 A0A1W2PR80 420 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 TNFSF12O43508 249 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 LILRA1O75019 489 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 SRP14P37108 136 aaKnown RBP11.75□□□□□ -0.53
GPC1-208ENST00000469694 MEF2BQ02080 365 aaPredicted RBP11.75□□□□□ -0.53
GPC1-208ENST00000469694 SAPCD1Q5SSQ6 148 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 RPUSD4Q96CM3 377 aaKnown RBP11.75□□□□□ -0.53
GPC1-208ENST00000469694 PSMG3Q9BT73 122 aaPredicted RBP11.75□□□□□ -0.53
GPC1-208ENST00000469694 REPIN1Q9BWE0 567 aaKnown RBP11.75□□□□□ -0.53
GPC1-208ENST00000469694 OR51B6Q9H340 312 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 MED12LQ86YW9 2145 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 DUXBA0A1W2PPF3 345 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 C5orf49A4QMS7 147 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 K7EM74 188 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 MDH2P40926 338 aaKnown RBP11.75□□□□□ -0.53
GPC1-208ENST00000469694 Q6ZPA2 131 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 Q6ZSR3 168 aa11.75□□□□□ -0.53
GPC1-208ENST00000469694 CHD3Q12873 2000 aaKnown RBP11.75□□□□□ -0.53
GPC1-208ENST00000469694 PCBD1P61457 104 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 RNPS1Q15287 305 aaKnown RBP11.74□□□□□ -0.53
GPC1-208ENST00000469694 TEX43Q6ZNM6 134 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 LRP11Q86VZ4 500 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 TAAR6Q96RI8 345 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 DNAJC4Q9NNZ3 241 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 TAAR3PQ9P1P4 343 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 PRR14LQ5THK1 2151 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 IGKV1-27A0A075B6S5 117 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 A0A1B0GUS0 222 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 H3BP45 60 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 RPL15P61313 204 aaKnown RBP11.74□□□□□ -0.53
GPC1-208ENST00000469694 LCN2P80188 198 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 SERF2P84101 59 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 BATFQ16520 125 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 SPIN3Q5JUX0 258 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 IGF2-ASQ6U949 168 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 C10orf35Q96D05 121 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 TRIB1Q96RU8 372 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 LINC00470Q9BZP3 86 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 TMEM106BQ9NUM4 274 aa11.74□□□□□ -0.53
GPC1-208ENST00000469694 TMEM250H0YL14 139 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 NGFP01138 241 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 RBX1P62877 108 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 TMEM267Q0VDI3 215 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms