RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 H0YIZ8 118 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 RAB29O14966 203 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 OPCMLQ14982 345 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 ESCO2Q56NI9 601 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 WDR25Q64LD2 544 aaPredicted RBP15.59■□□□□ 0.09
SMC4-209ENST00000468653 SPAG16Q8N0X2 631 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 ARL6Q9H0F7 186 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 NARFLQ9H6Q4 476 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 GAB2Q9UQC2 676 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 LINC00473A8K010 186 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 C17orf98A8MV24 154 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 IGKV1-39P01597 117 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 MBPP02686 304 aaPredicted RBP15.58■□□□□ 0.08
SMC4-209ENST00000468653 IGKV1D-39P04432 117 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 S100A11P31949 105 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 AKR1C2P52895 323 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 DLX6P56179 175 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 SLC25A48Q6ZT89 311 aaKnown RBP15.58■□□□□ 0.08
SMC4-209ENST00000468653 LYG1Q8N1E2 194 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.58■□□□□ 0.08
SMC4-209ENST00000468653 CCL19Q99731 98 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 PATZ1Q9HBE1 687 aaKnown RBP15.58■□□□□ 0.08
SMC4-209ENST00000468653 ZFP57Q9NU63 452 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 OR5AC2Q9NZP5 309 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 ARID1AO14497 2285 aa15.58■□□□□ 0.08
SMC4-209ENST00000468653 A0A0D9SG52 128 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 A0A1W2PPH5 198 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 RAMP3O60896 148 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 PROP1O75360 226 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 OR2F2O95006 317 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 LYL1P12980 280 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 COX6B1P14854 86 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 EPHA1P21709 976 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 DUTP33316 252 aaKnown RBP15.57■□□□□ 0.08
SMC4-209ENST00000468653 NUP62P37198 522 aaPredicted RBP15.57■□□□□ 0.08
SMC4-209ENST00000468653 ZNF816Q0VGE8 651 aaPredicted RBP15.57■□□□□ 0.08
SMC4-209ENST00000468653 OR2F1Q13607 317 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 ACOT7LQ6ZUV0 252 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 OR4D5Q8NGN0 318 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 OR1S1Q8NH92 325 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 RRNAD1Q96FB5 475 aaKnown RBP15.57■□□□□ 0.08
SMC4-209ENST00000468653 FAM212BQ9NTI7 297 aaPredicted RBP15.57■□□□□ 0.08
SMC4-209ENST00000468653 SAA2-SAA4A0A096LPE2 208 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 PPIAL4CA0A0B4J2A2 164 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 A1L4Q6 167 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 SAA2P0DJI9 122 aaPredicted RBP15.57■□□□□ 0.08
SMC4-209ENST00000468653 PPIAL4GP0DN37 164 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 LINC00205P59089 165 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 GNB2P62879 340 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 NCR3LG1Q68D85 454 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 SP5Q6BEB4 398 aaPredicted RBP15.57■□□□□ 0.08
SMC4-209ENST00000468653 CD300LFQ8TDQ1 290 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 LSM10Q969L4 123 aaKnown RBP15.57■□□□□ 0.08
SMC4-209ENST00000468653 GPR146Q96CH1 333 aa15.57■□□□□ 0.08
SMC4-209ENST00000468653 CLEC18AA5D8T8 446 aa15.56■□□□□ 0.08
SMC4-209ENST00000468653 RGS13O14921 159 aa15.56■□□□□ 0.08
SMC4-209ENST00000468653 ST8SIA3O43173 380 aa15.56■□□□□ 0.08
SMC4-209ENST00000468653 DEDDO75618 318 aa15.56■□□□□ 0.08
SMC4-209ENST00000468653 ATG12O94817 140 aa15.56■□□□□ 0.08
SMC4-209ENST00000468653 ZNF345Q14585 488 aa15.56■□□□□ 0.08
SMC4-209ENST00000468653 CLEC18CQ8NCF0 446 aa15.56■□□□□ 0.08
SMC4-209ENST00000468653 PAIP2BQ9ULR5 123 aaKnown RBP15.56■□□□□ 0.08
SMC4-209ENST00000468653 PRELID3BQ9Y3B1 194 aa15.56■□□□□ 0.08
SMC4-209ENST00000468653 A0A0G2JRQ6 117 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 A0A1B0GU03 582 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 RNF222A6NCQ9 220 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 K7EPK0 472 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 KCNAB3O43448 404 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 IGKV1-5P01602 117 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 IGHV1-8P0DP01 117 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 ODF3L1Q8IXM7 274 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 KCNRGQ8N5I3 272 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 FAM71E2Q8N5Q1 922 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 C8orf46Q8TAG6 207 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 S1PR3Q99500 378 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 MALRD1Q5VYJ5 2156 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 DOCK11Q5JSL3 2073 aa15.55■□□□□ 0.08
SMC4-209ENST00000468653 S1PR2O95136 353 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 SLC25A6P12236 298 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 NKX2-1P43699 371 aaPredicted RBP15.54■□□□□ 0.08
SMC4-209ENST00000468653 BRWD1-AS2P59051 145 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 ZNF525Q8N782 197 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 OR8H1Q8NGG4 311 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 IGFBPL1Q8WX77 278 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 SSBP3Q9BWW4 388 aaPredicted RBP15.54■□□□□ 0.08
SMC4-209ENST00000468653 HEXA-AS1Q9H8Q6 139 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 POMT1Q9Y6A1 747 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 SESN1Q9Y6P5 492 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 F5H0A9 414 aaPredicted RBP15.54■□□□□ 0.08
SMC4-209ENST00000468653 FCGR3BO75015 233 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 IZUMO4Q1ZYL8 232 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 C1orf229Q6ZS94 237 aaPredicted RBP15.54■□□□□ 0.08
SMC4-209ENST00000468653 ZNRD1Q9P1U0 126 aa15.54■□□□□ 0.08
SMC4-209ENST00000468653 AKAP6Q13023 2319 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 UBR5O95071 2799 aaPredicted RBP15.53■□□□□ 0.08
SMC4-209ENST00000468653 KANTRA0A1W2PQU2 76 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 KRASP01116 189 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 IGHV4-39P01824 125 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 G6PCP35575 357 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 KIR2DS2P43631 304 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms