RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 Q9N2K0 584 aa18.93■□□□□ 0.62
PTCH1-210ENST00000468211 SCN3BQ9NY72 215 aa18.93■□□□□ 0.62
PTCH1-210ENST00000468211 FOXA2Q9Y261 457 aaPredicted RBP18.93■□□□□ 0.62
PTCH1-210ENST00000468211 WASHC3Q9Y3C0 194 aa18.93■□□□□ 0.62
PTCH1-210ENST00000468211 HUWE1Q7Z6Z7 4374 aaKnown RBP18.93■□□□□ 0.62
PTCH1-210ENST00000468211 IGKV1-6A0A0C4DH72 117 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 H7C2Y5 167 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 OVOL1O14753 267 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 LY86O95711 162 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 GSTP1P09211 210 aaKnown RBP18.92■□□□□ 0.62
PTCH1-210ENST00000468211 ARSBP15848 533 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 INSL3P51460 131 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 CLDN12P56749 244 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 TPBGQ13641 420 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 PLGLAQ15195 96 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 NRG4Q8WWG1 115 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 ARHGAP5-AS1Q96IT6 56 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 CLCC1Q96S66 551 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 URM1Q9BTM9 101 aaKnown RBP18.92■□□□□ 0.62
PTCH1-210ENST00000468211 ISYNA1Q9NPH2 558 aa18.92■□□□□ 0.62
PTCH1-210ENST00000468211 HSMCR30P0CW71 290 aa18.91■□□□□ 0.62
PTCH1-210ENST00000468211 MC5RP33032 325 aa18.91■□□□□ 0.62
PTCH1-210ENST00000468211 VEGFCP49767 419 aa18.91■□□□□ 0.62
PTCH1-210ENST00000468211 AQP4P55087 323 aa18.91■□□□□ 0.62
PTCH1-210ENST00000468211 ABHD5Q8WTS1 349 aa18.91■□□□□ 0.62
PTCH1-210ENST00000468211 PECRQ9BY49 303 aa18.91■□□□□ 0.62
PTCH1-210ENST00000468211 DUSP21Q9H596 190 aa18.91■□□□□ 0.62
PTCH1-210ENST00000468211 HSF4Q9ULV5 492 aa18.91■□□□□ 0.62
PTCH1-210ENST00000468211 IGHV4OR15-8A0A075B7B6 117 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 A0A087WW49 117 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 IGKV1-16P04430 117 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 LGALS1P09382 135 aaKnown RBP18.9■□□□□ 0.62
PTCH1-210ENST00000468211 ZBTB25P24278 435 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 PLA2G7Q13093 441 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 PSG5Q15238 335 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 PLAC9Q5JTB6 97 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 CD200R1LQ6Q8B3 271 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 PPP1R27Q86WC6 154 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 ZNF383Q8NA42 475 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 PTX4Q96A99 478 aa18.9■□□□□ 0.62
PTCH1-210ENST00000468211 METTL1Q9UBP6 276 aaKnown RBP18.9■□□□□ 0.62
PTCH1-210ENST00000468211 LINC01619G3V211 115 aa18.89■□□□□ 0.61
PTCH1-210ENST00000468211 HSPA12AO43301 675 aa18.89■□□□□ 0.61
PTCH1-210ENST00000468211 RBBP9O75884 186 aa18.89■□□□□ 0.61
PTCH1-210ENST00000468211 IGHV3-11P01762 117 aa18.89■□□□□ 0.61
PTCH1-210ENST00000468211 RAB11BQ15907 218 aa18.89■□□□□ 0.61
PTCH1-210ENST00000468211 ZNF429Q86V71 674 aa18.89■□□□□ 0.61
PTCH1-210ENST00000468211 LFNGQ8NES3 379 aa18.89■□□□□ 0.61
PTCH1-210ENST00000468211 EDARADDQ8WWZ3 215 aa18.89■□□□□ 0.61
PTCH1-210ENST00000468211 MS4A10Q96PG2 267 aa18.89■□□□□ 0.61
PTCH1-210ENST00000468211 C12orf4Q9NQ89 552 aa18.89■□□□□ 0.61
PTCH1-210ENST00000468211 SAP30O75446 220 aa18.88■□□□□ 0.61
PTCH1-210ENST00000468211 CA2P00918 260 aa18.88■□□□□ 0.61
PTCH1-210ENST00000468211 FABP5Q01469 135 aa18.88■□□□□ 0.61
PTCH1-210ENST00000468211 ACTBL2Q562R1 376 aa18.88■□□□□ 0.61
PTCH1-210ENST00000468211 UNQ5815/PRO19632Q6UWF5 114 aa18.88■□□□□ 0.61
PTCH1-210ENST00000468211 TCTEX1D1Q8N7M0 179 aa18.88■□□□□ 0.61
PTCH1-210ENST00000468211 GHITMQ9H3K2 345 aa18.88■□□□□ 0.61
PTCH1-210ENST00000468211 SMAD5-AS1Q9Y6J3 95 aa18.88■□□□□ 0.61
PTCH1-210ENST00000468211 SPNP16150 400 aa18.87■□□□□ 0.61
PTCH1-210ENST00000468211 C2orf76Q3KRA6 126 aa18.87■□□□□ 0.61
PTCH1-210ENST00000468211 AKIRIN2Q53H80 203 aa18.87■□□□□ 0.61
PTCH1-210ENST00000468211 ARPC1AQ92747 370 aa18.87■□□□□ 0.61
PTCH1-210ENST00000468211 FAM3DQ96BQ1 224 aa18.87■□□□□ 0.61
PTCH1-210ENST00000468211 RNF5Q99942 180 aa18.87■□□□□ 0.61
PTCH1-210ENST00000468211 CMSS1Q9BQ75 279 aaKnown RBP18.87■□□□□ 0.61
PTCH1-210ENST00000468211 TPRKBQ9Y3C4 175 aa18.87■□□□□ 0.61
PTCH1-210ENST00000468211 LDLRAD4O15165 306 aa18.86■□□□□ 0.61
PTCH1-210ENST00000468211 RGS10O43665 173 aa18.86■□□□□ 0.61
PTCH1-210ENST00000468211 CD3GP09693 182 aa18.86■□□□□ 0.61
PTCH1-210ENST00000468211 CPEP16870 476 aa18.86■□□□□ 0.61
PTCH1-210ENST00000468211 CALRP27797 417 aaKnown RBP18.86■□□□□ 0.61
PTCH1-210ENST00000468211 MAP2K4P45985 399 aa18.86■□□□□ 0.61
PTCH1-210ENST00000468211 TMEM267Q0VDI3 215 aaPredicted RBP18.86■□□□□ 0.61
PTCH1-210ENST00000468211 ZNF562Q6V9R5 426 aa18.86■□□□□ 0.61
PTCH1-210ENST00000468211 RDH8Q9NYR8 311 aa18.86■□□□□ 0.61
PTCH1-210ENST00000468211 MGAT4AQ9UM21 535 aa18.86■□□□□ 0.61
PTCH1-210ENST00000468211 KCNK7Q9Y2U2 307 aa18.86■□□□□ 0.61
PTCH1-210ENST00000468211 ARPC1BO15143 372 aaKnown RBP18.85■□□□□ 0.61
PTCH1-210ENST00000468211 ARL6IP5O75915 188 aa18.85■□□□□ 0.61
PTCH1-210ENST00000468211 TPPP2P59282 170 aa18.85■□□□□ 0.61
PTCH1-210ENST00000468211 RPS16P62249 146 aaKnown RBP18.85■□□□□ 0.61
PTCH1-210ENST00000468211 SSBP2P81877 361 aaPredicted RBP18.85■□□□□ 0.61
PTCH1-210ENST00000468211 MLLT11Q13015 90 aaPredicted RBP18.85■□□□□ 0.61
PTCH1-210ENST00000468211 TRAM1Q15629 374 aa18.85■□□□□ 0.61
PTCH1-210ENST00000468211 ACSM6Q6P461 480 aa18.85■□□□□ 0.61
PTCH1-210ENST00000468211 SBSPONQ8IVN8 264 aa18.85■□□□□ 0.61
PTCH1-210ENST00000468211 RHOVQ96L33 236 aa18.85■□□□□ 0.61
PTCH1-210ENST00000468211 ZNF221Q9UK13 617 aa18.85■□□□□ 0.61
PTCH1-210ENST00000468211 DNAH7Q8WXX0 4024 aa18.84■□□□□ 0.61
PTCH1-210ENST00000468211 TMEM272A0A1B0GTI8 110 aa18.84■□□□□ 0.61
PTCH1-210ENST00000468211 TRDCB7Z8K6 153 aa18.84■□□□□ 0.61
PTCH1-210ENST00000468211 SLC25A17O43808 307 aa18.84■□□□□ 0.61
PTCH1-210ENST00000468211 MOGAT2Q3SYC2 334 aa18.84■□□□□ 0.61
PTCH1-210ENST00000468211 HES5Q5TA89 166 aa18.84■□□□□ 0.61
PTCH1-210ENST00000468211 PYHIN1Q6K0P9 492 aa18.84■□□□□ 0.61
PTCH1-210ENST00000468211 OVCH2Q7RTZ1 564 aa18.84■□□□□ 0.61
PTCH1-210ENST00000468211 OR56B1Q8NGI3 324 aa18.84■□□□□ 0.61
PTCH1-210ENST00000468211 TSNAXQ99598 290 aaKnown RBP18.84■□□□□ 0.61
PTCH1-210ENST00000468211 MGLLQ99685 303 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms