RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 LPAR6P43657 344 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 RAB5CP51148 216 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 ERVK-16P61578 105 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 FAM201AQ5SY85 155 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 SLC25A48Q6ZT89 311 aaKnown RBP8.43□□□□□ -1.06
MSH5-213ENST00000468136 C5orf24Q7Z6I8 188 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 STX12Q86Y82 276 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 LINC00311Q8N616 119 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 FAM216BQ8N7L0 139 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 DMBX1Q8NFW5 382 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 OR4S2Q8NH73 311 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 SAT2Q96F10 170 aaPredicted RBP8.43□□□□□ -1.06
MSH5-213ENST00000468136 C11orf1Q9H5F2 150 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.43□□□□□ -1.06
MSH5-213ENST00000468136 MIOXQ9UGB7 285 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 RCL1Q9Y2P8 373 aaKnown RBP8.43□□□□□ -1.06
MSH5-213ENST00000468136 SESN1Q9Y6P5 492 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 FRYQ5TBA9 3013 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 ASPMQ8IZT6 3477 aa8.43□□□□□ -1.06
MSH5-213ENST00000468136 ANKHD1Q8IWZ3 2542 aaKnown RBP8.42□□□□□ -1.06
MSH5-213ENST00000468136 SIAH2O43255 324 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 PLAUP00749 431 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 GNLYP22749 145 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 GRNP28799 593 aaKnown RBP8.42□□□□□ -1.06
MSH5-213ENST00000468136 TMEM33P57088 247 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 AARDQ4LEZ3 155 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 C11orf71Q6IPW1 123 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 H2BFWTQ7Z2G1 175 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 FOXRED2Q8IWF2 684 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 SLC7A5P1Q8MH63 180 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 EIF4E3Q8N5X7 224 aaKnown RBP8.42□□□□□ -1.06
MSH5-213ENST00000468136 OR52E5Q8NH55 327 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 ZNF596Q8TC21 504 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 NEUROG1Q92886 237 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 SMIM8Q96KF7 97 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 PARP12Q9H0J9 701 aaKnown RBP8.42□□□□□ -1.06
MSH5-213ENST00000468136 ARV1Q9H2C2 271 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 IFI27L2Q9H2X8 130 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 CYTL1Q9NRR1 136 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 CACNG5Q9UF02 275 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 RALYQ9UKM9 306 aaKnown RBP8.42□□□□□ -1.06
MSH5-213ENST00000468136 RNF150Q9ULK6 438 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 KIAA2026Q5HYC2 2103 aa8.42□□□□□ -1.06
MSH5-213ENST00000468136 PRRC2CQ9Y520 2896 aaKnown RBP8.41□□□□□ -1.06
MSH5-213ENST00000468136 ICE1Q9Y2F5 2266 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 A0A087X0M5 115 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 A0A1B0GX30 115 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 MSGN1A6NI15 193 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 M0R1X1 148 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 SYNGR2O43760 224 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 IGKV1-39P01597 117 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 IGKV1-5P01602 117 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 IGHV2-70P01814 119 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 IGKV1D-39P04432 117 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 NMBP08949 121 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 SEC11BP0C7V7 166 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 P0C879 139 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 NQO2P16083 231 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 IGFBP2P18065 325 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 IL3RAP26951 378 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 POLR2GP62487 172 aaKnown RBP eCLIP8.41□□□□□ -1.06
MSH5-213ENST00000468136 HBG1P69891 147 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 HBG2P69892 147 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 RPP30P78346 268 aaKnown RBP8.41□□□□□ -1.06
MSH5-213ENST00000468136 BLOC1S1P78537 153 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 ALKAL2Q6UX46 152 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 STPG2Q8N412 459 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 ZNF439Q8NDP4 499 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 OR8B3Q8NGG8 313 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 C8orf46Q8TAG6 207 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 UBALD1Q8TB05 177 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 OR8B2Q96RD0 313 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 DCTN5Q9BTE1 182 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 CHODLQ9H9P2 273 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 HSPB7Q9UBY9 170 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 FBXL17Q9UF56 701 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 TANC2Q9HCD6 1990 aa8.41□□□□□ -1.06
MSH5-213ENST00000468136 CFAP47Q6ZTR5 3102 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 DMXL2Q8TDJ6 3036 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 IGHV3-43A0A0B4J1X8 118 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 DVL1O14640 695 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 FGF16O43320 207 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 CHST1O43916 411 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 SSSCA1O60232 199 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 HRASP01112 189 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 TFF1P04155 84 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 DANCRP0C864 163 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 IGHV3-43DP0DP04 118 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 CAV2P51636 162 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 ATP5IP56385 69 aaPredicted RBP8.4□□□□□ -1.06
MSH5-213ENST00000468136 RPL30P62888 115 aaKnown RBP8.4□□□□□ -1.06
MSH5-213ENST00000468136 EWSR1Q01844 656 aaKnown RBP eCLIP8.4□□□□□ -1.06
MSH5-213ENST00000468136 POU2AF1Q16633 256 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 ATP6V1FQ16864 119 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 RTL8BQ17RB0 113 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 CT45A1Q5HYN5 189 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 CXorf66Q5JRM2 361 aaPredicted RBP8.4□□□□□ -1.06
MSH5-213ENST00000468136 TMEM200BQ69YZ2 307 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 TCF23Q7RTU1 214 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 HSD17B13Q7Z5P4 300 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms