RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 COPEO14579 308 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 ITGB1BP1O14713 200 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 HPGDSO60760 199 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 ZNF189O75820 626 aaPredicted RBP1.18□□□□□ -2.22
ATG3-204ENST00000467275 SOD1P00441 154 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 CD7P09564 240 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 LINC00614P0C842 121 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 CCL3P10147 92 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 ESDP10768 282 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 SLC25A16P16260 332 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 NPPCP23582 126 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 OR10J1P30954 320 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 CD79BP40259 229 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 SNAP25P60880 206 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 HERVK_113P63121 156 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 HPCAP84074 193 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 SMAGPQ0VAQ4 97 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 FAM19A5Q7Z5A7 132 aaPredicted RBP1.18□□□□□ -2.22
ATG3-204ENST00000467275 NATD1Q8N6N6 113 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 CCDC112Q8NEF3 446 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 OR10A6Q8NH74 314 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 FNDC9Q8TBE3 224 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 C16orf78Q8WTQ4 265 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.18□□□□□ -2.22
ATG3-204ENST00000467275 TLCD1Q96CP7 247 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 DNAJC30Q96LL9 226 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 DCUN1D5Q9BTE7 237 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 NKX6-2Q9C056 277 aaPredicted RBP1.18□□□□□ -2.22
ATG3-204ENST00000467275 TXNL4BQ9NX01 149 aaKnown RBP1.18□□□□□ -2.22
ATG3-204ENST00000467275 DICER1Q9UPY3 1922 aaKnown RBP1.18□□□□□ -2.22
ATG3-204ENST00000467275 ADGRB3O60242 1522 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 SLIT2O94813 1529 aa1.18□□□□□ -2.22
ATG3-204ENST00000467275 PLCH2O75038 1416 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 STRCP1A6NGW2 1772 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 TINCRA0A1B0GVN0 87 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 LY6LH3BQJ8 138 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 ZW10O43264 779 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 COCHO43405 550 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 STX10O60499 249 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 YEATS4O95619 227 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 CRYBA1P05813 215 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 CRYBB3P26998 211 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 ATP6V0CP27449 155 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 CA7P43166 264 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 EMP2P54851 167 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 MAP3K7CLP57077 242 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 SS18Q15532 418 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 ATP5L2Q7Z4Y8 100 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 SLC37A2Q8TED4 501 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 CYGBQ8WWM9 190 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 ASB13Q8WXK3 278 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 SMIM19Q96E16 107 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 MBOAT7Q96N66 472 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 MGLLQ99685 303 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 MND1Q9BWT6 205 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 UPF3BQ9BZI7 483 aaKnown RBP1.17□□□□□ -2.22
ATG3-204ENST00000467275 MS4A6AQ9H2W1 248 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 COL4A2P08572 1712 aa1.17□□□□□ -2.22
ATG3-204ENST00000467275 TRAV8-1A0A0A6YYK1 113 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 TEX50A0A1B0GTY4 177 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 A0A1W2PQL4 384 aaPredicted RBP1.16□□□□□ -2.22
ATG3-204ENST00000467275 GRIFINA4D1Z8 144 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 H3BPC8 53 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 SLC17A3O00476 420 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 MRASO14807 208 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 CETN3O15182 167 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 P0DMU3 169 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 FAM231AP0DMU4 169 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 FAM231CP0DMU5 169 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 GZMBP10144 247 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 CD36P16671 472 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 CXCL2P19875 107 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 CXCL3P19876 107 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 CRHBPP24387 322 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 TAS2R45P59539 299 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 DEFB103AP81534 67 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 MED21Q13503 144 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 PCOTHQ58A44 107 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.16□□□□□ -2.22
ATG3-204ENST00000467275 LGALS9CQ6DKI2 356 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 TMEM251Q8N6I4 163 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 OR2D3Q8NGH3 330 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 TMBIM1Q969X1 311 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 CPNE2Q96FN4 548 aaPredicted RBP1.16□□□□□ -2.22
ATG3-204ENST00000467275 ZNF471Q9BX82 626 aaPredicted RBP1.16□□□□□ -2.22
ATG3-204ENST00000467275 TTTY12Q9BZ98 90 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 NSRP1Q9H0G5 558 aaKnown RBP1.16□□□□□ -2.22
ATG3-204ENST00000467275 CXCL16Q9H2A7 254 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 TMEM106BQ9NUM4 274 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 FAM206AQ9NX38 181 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 SNX12Q9UMY4 172 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 A0A1W2PP64 1363 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 KIAA2026Q5HYC2 2103 aa1.16□□□□□ -2.22
ATG3-204ENST00000467275 EIF4G1Q04637 1599 aaKnown RBP1.16□□□□□ -2.22
ATG3-204ENST00000467275 IGHV3-15A0A0B4J1V0 119 aa1.15□□□□□ -2.23
ATG3-204ENST00000467275 C1orf232A0A0U1RR37 186 aa1.15□□□□□ -2.23
ATG3-204ENST00000467275 VPS37CA5D8V6 355 aaPredicted RBP1.15□□□□□ -2.23
ATG3-204ENST00000467275 OR5K4A6NMS3 321 aa1.15□□□□□ -2.23
ATG3-204ENST00000467275 GOLGA8KD6RF30 607 aa1.15□□□□□ -2.23
ATG3-204ENST00000467275 F5H768 121 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms