RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 RNF133Q8WVZ7 376 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 TP53RKQ96S44 253 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 PXMP4Q9Y6I8 212 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 ANOS1P23352 680 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 MVDP53602 400 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 TCTAP57738 103 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 ZNF56Q15929 161 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 AWAT1Q58HT5 328 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 LYZL2Q7Z4W2 148 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 ADAT3Q96EY9 351 aaPredicted RBP7.53□□□□□ -1.2
HPS4-209ENST00000466781 HSPB7Q9UBY9 170 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 MGAMO43451 1857 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 DSPPQ9NZW4 1301 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 KBTBD11O94819 623 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 CA2P00918 260 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 FCGR2BP31994 310 aaPredicted RBP7.53□□□□□ -1.2
HPS4-209ENST00000466781 TPRX1Q8N7U7 411 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 POM121Q96HA1 1249 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 SFXN3Q9BWM7 321 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 IL36RNQ9UBH0 155 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 CDS2O95674 445 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 GPX1P07203 203 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 OR10J1P30954 320 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 RPS20P60866 119 aaKnown RBP7.53□□□□□ -1.2
HPS4-209ENST00000466781 ARL6IP6Q8N6S5 226 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 MMP9P14780 707 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 CKS2P33552 79 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 TNFSF10P50591 281 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 HMGA2P52926 109 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 RPL8P62917 257 aaKnown RBP7.53□□□□□ -1.2
HPS4-209ENST00000466781 LBHQ53QV2 105 aaPredicted RBP7.53□□□□□ -1.2
HPS4-209ENST00000466781 ZNF880Q6PDB4 577 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 TMEM101Q96IK0 257 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 FOXJ2Q9P0K8 574 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 ZNF646O15015 1829 aaPredicted RBP7.53□□□□□ -1.2
HPS4-209ENST00000466781 C17orf51A8MQB3 221 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 ZNHIT1O43257 154 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 OR2H2O95918 312 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 FCGR3AP08637 254 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 CD99P14209 185 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 PSG4Q00888 419 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 ZP4Q12836 540 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 DNLZQ5SXM8 178 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 GPR82Q96P67 336 aa7.53□□□□□ -1.2
HPS4-209ENST00000466781 EIF4EBP2Q13542 120 aaPredicted RBP7.52□□□□□ -1.21
HPS4-209ENST00000466781 MSRB3Q8IXL7 192 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 PRSS27Q9BQR3 290 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 TLNRD1Q9H1K6 362 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 ELOVL5Q9NYP7 299 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.52□□□□□ -1.21
HPS4-209ENST00000466781 A1L4Q6 167 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 CRHP06850 196 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 LINC00869P0C866 280 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 ZNF430Q9H8G1 570 aaPredicted RBP7.52□□□□□ -1.21
HPS4-209ENST00000466781 SIRT7Q9NRC8 400 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 MIA3Q5JRA6 1907 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 IGHV1-69-2A0A0G2JMI3 117 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 A0A0J9YW62 118 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 FAM74A7A6NL05 159 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 MPV17P39210 176 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 FGF12P61328 243 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 NUTF2P61970 127 aaKnown RBP7.52□□□□□ -1.21
HPS4-209ENST00000466781 HDHD3Q9BSH5 251 aaPredicted RBP7.52□□□□□ -1.21
HPS4-209ENST00000466781 ALKBH7Q9BT30 221 aaPredicted RBP7.52□□□□□ -1.21
HPS4-209ENST00000466781 MAP1LC3AQ9H492 121 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 CALYQ9NYX4 217 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 A0A1W2PR77 199 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 A8MWL6 223 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 LHFPL5Q8TAF8 219 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 KCNK17Q96T54 332 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 MYO9BQ13459 2157 aa7.52□□□□□ -1.21
HPS4-209ENST00000466781 LIPFP07098 398 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 HOXA6P31267 233 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 ARF6P62330 175 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 ABHD12Q8N2K0 398 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 SLIRPQ9GZT3 109 aaKnown RBP7.51□□□□□ -1.21
HPS4-209ENST00000466781 NUP205Q92621 2012 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 COMPP49747 757 aaPredicted RBP7.51□□□□□ -1.21
HPS4-209ENST00000466781 SELENOTP62341 195 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 MGAT2Q10469 447 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 HOGA1Q86XE5 327 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 ST6GALNAC2Q9UJ37 374 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 FOXD3Q9UJU5 478 aaPredicted RBP7.51□□□□□ -1.21
HPS4-209ENST00000466781 RBFOX2O43251 390 aaKnown RBP eCLIP7.51□□□□□ -1.21
HPS4-209ENST00000466781 ATP1A1-AS1Q5TC04 95 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 OR4A47Q6IF82 309 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 TMEM52Q8NDY8 209 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 GEMIN7Q9H840 131 aaKnown RBP7.51□□□□□ -1.21
HPS4-209ENST00000466781 OPN4Q9UHM6 478 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 HINT1P49773 126 aaPredicted RBP7.51□□□□□ -1.21
HPS4-209ENST00000466781 FAM27BQ5VT28 67 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 CLEC7AQ9BXN2 247 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 A0A0U1RQV5 110 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 LOC101059948A0A1B0GTJ6 334 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 VSIG8P0DPA2 414 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 CD81P60033 236 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 C2orf83Q53S99 150 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 FAM74A4Q5TZK3 123 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 YAE1D1Q9NRH1 226 aa7.51□□□□□ -1.21
HPS4-209ENST00000466781 H0Y980 276 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms