RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 SCGB3A2Q96PL1 93 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 HIVEP1P15822 2718 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 M0R1X1 148 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 PEX14O75381 377 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 ZNF626Q68DY1 528 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 LHFPL4Q7Z7J7 247 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 LINC00311Q8N616 119 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 C8orf31Q8N9H6 132 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 OR52B4Q8NGK2 314 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 ZNF596Q8TC21 504 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 SEC22CQ9BRL7 303 aa13.98□□□□□ -0.17
PTPRU-206ENST00000465525 MAST4O15021 2626 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 A0A0B4J293 547 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 CENPVL3A0A0U1RRI6 287 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 ODF3BA8MYP8 253 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 RAB29O14966 203 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 HNRNPCP07910 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
PTPRU-206ENST00000465525 IGHV4-38-2P0DP08 117 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 TBC1D26Q86UD7 250 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 SLC25A42Q86VD7 318 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 BEND2Q8NDZ0 799 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 BVESQ8NE79 360 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 OR51H1Q8NH63 302 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 C17orf50Q8WW18 174 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 SMR3AQ99954 134 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 ZNF251Q9BRH9 671 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 PRR13Q9NZ81 148 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 CSPG4Q6UVK1 2322 aa13.97□□□□□ -0.17
PTPRU-206ENST00000465525 TEX13DA0A0J9YY54 714 aaPredicted RBP13.96□□□□□ -0.17
PTPRU-206ENST00000465525 BUB1B-PAK6H3BSN5 160 aa13.96□□□□□ -0.17
PTPRU-206ENST00000465525 PGLYRP1O75594 196 aaPredicted RBP13.96□□□□□ -0.17
PTPRU-206ENST00000465525 LY6G6DO95868 133 aa13.96□□□□□ -0.17
PTPRU-206ENST00000465525 VAMP1P23763 118 aa13.96□□□□□ -0.17
PTPRU-206ENST00000465525 PPP1R1AQ13522 171 aa13.96□□□□□ -0.17
PTPRU-206ENST00000465525 C4orf46Q504U0 113 aa13.96□□□□□ -0.17
PTPRU-206ENST00000465525 OR2B11Q5JQS5 317 aa13.96□□□□□ -0.17
PTPRU-206ENST00000465525 CMTM1Q8IZ96 169 aa13.96□□□□□ -0.17
PTPRU-206ENST00000465525 RTN4IP1Q8WWV3 396 aaPredicted RBP13.96□□□□□ -0.17
PTPRU-206ENST00000465525 YAE1D1Q9NRH1 226 aa13.96□□□□□ -0.17
PTPRU-206ENST00000465525 PIPOXQ9P0Z9 390 aa13.96□□□□□ -0.17
PTPRU-206ENST00000465525 A8MV72 311 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-206ENST00000465525 UBE2E1P51965 193 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 RPL30P62888 115 aaKnown RBP13.95□□□□□ -0.18
PTPRU-206ENST00000465525 SLC9A3R2Q15599 337 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 SP6Q3SY56 376 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 CLEC9AQ6UXN8 241 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 BRD3OSQ6XYD6 125 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 GLDNQ6ZMI3 551 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-206ENST00000465525 ZNF486Q96H40 463 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-206ENST00000465525 AKR1E2Q96JD6 320 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 MRPL20Q9BYC9 149 aaKnown RBP13.95□□□□□ -0.18
PTPRU-206ENST00000465525 HILPDAQ9Y5L2 63 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 SOX21Q9Y651 276 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-206ENST00000465525 LINC00473A8K010 186 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 MPPED1O15442 326 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 OR4E1P0C645 316 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 HTR1DP28221 377 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 SUPT4H1P63272 117 aaKnown RBP13.95□□□□□ -0.18
PTPRU-206ENST00000465525 EIF4EBP1Q13541 118 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-206ENST00000465525 TATDN3Q17R31 274 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 KLF17Q5JT82 389 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-206ENST00000465525 ZNF833PQ6ZTB9 187 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 PIP4P2Q8N4L2 257 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 CCDC71LQ8N9Z2 235 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 ST6GALNAC6Q969X2 333 aa13.95□□□□□ -0.18
PTPRU-206ENST00000465525 AMMECR1Q9Y4X0 333 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-206ENST00000465525 IGHV1-69DA0A0B4J2H0 117 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 CRYM-AS1A6NIL9 109 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 NPFFO15130 113 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 SLC22A5O76082 557 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 DHFRP00374 187 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 IGHV1-69P01742 117 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 IL3RAP26951 378 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 SAA4P35542 130 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 LGALS4P56470 323 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 TAS2R31P59538 309 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 UBE2MP61081 183 aaKnown RBP13.94□□□□□ -0.18
PTPRU-206ENST00000465525 RND3P61587 244 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-206ENST00000465525 CASTOR1Q8WTX7 329 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 FAM216AQ8WUB2 273 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 TCTEX1D2Q8WW35 142 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 TP53RKQ96S44 253 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 S1PR3Q99500 378 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 ALG5Q9Y673 324 aa13.94□□□□□ -0.18
PTPRU-206ENST00000465525 LY6LH3BQJ8 138 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 HLA-AP01891 365 aaKnown RBP13.93□□□□□ -0.18
PTPRU-206ENST00000465525 OR5AC1P0C628 307 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 S100GP29377 79 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 DUTP33316 252 aaKnown RBP13.93□□□□□ -0.18
PTPRU-206ENST00000465525 MECP2P51608 486 aaKnown RBP13.93□□□□□ -0.18
PTPRU-206ENST00000465525 CBX3Q13185 183 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 TMEM128Q5BJH2 165 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 GPR157Q5UAW9 335 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 KCTD9Q7L273 389 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 SGPP2Q8IWX5 399 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 DYNAPQ8N1N2 210 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 TEX29Q8N6K0 151 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 ZBTB34Q8NCN2 500 aa13.93□□□□□ -0.18
PTPRU-206ENST00000465525 RPEQ96AT9 228 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms