RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CDC34P49427 236 aaPredicted RBP6.15□□□□□ -1.42
USP48-206ENST00000464577 TPPP2P59282 170 aa6.15□□□□□ -1.42
USP48-206ENST00000464577 GNB1P62873 340 aa6.15□□□□□ -1.42
USP48-206ENST00000464577 GNG3P63215 75 aa6.15□□□□□ -1.42
USP48-206ENST00000464577 GUSBP11Q6P575 273 aa6.15□□□□□ -1.42
USP48-206ENST00000464577 ZNF497Q6ZNH5 498 aa6.15□□□□□ -1.42
USP48-206ENST00000464577 TMEM256Q8N2U0 113 aa6.15□□□□□ -1.42
USP48-206ENST00000464577 DRAM1Q8N682 238 aa6.15□□□□□ -1.42
USP48-206ENST00000464577 IL1F10Q8WWZ1 152 aa6.15□□□□□ -1.42
USP48-206ENST00000464577 GMPPAQ96IJ6 420 aaPredicted RBP6.15□□□□□ -1.42
USP48-206ENST00000464577 ZNF552Q9H707 407 aaPredicted RBP6.15□□□□□ -1.42
USP48-206ENST00000464577 TMEM106BQ9NUM4 274 aa6.15□□□□□ -1.42
USP48-206ENST00000464577 MRPS18CQ9Y3D5 142 aaKnown RBP6.15□□□□□ -1.42
USP48-206ENST00000464577 EML6Q6ZMW3 1958 aa6.15□□□□□ -1.43
USP48-206ENST00000464577 UNC13CQ8NB66 2214 aa6.15□□□□□ -1.43
USP48-206ENST00000464577 ASXL3Q9C0F0 2248 aa6.15□□□□□ -1.43
USP48-206ENST00000464577 CHD3Q12873 2000 aaKnown RBP6.15□□□□□ -1.43
USP48-206ENST00000464577 C5orf49A4QMS7 147 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 LRRC30A6NM36 301 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 ANKRD30BLA7E2S9 258 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 ZNF705FA8MVS1 300 aaPredicted RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 C1QTNF9BB2RNN3 333 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 J3QT63 122 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 ZNF705DP0CH99 300 aaPredicted RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 ZNF705BP0CI00 300 aaPredicted RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 SRFP11831 508 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 EN2P19622 333 aaPredicted RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 GCH1P30793 250 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 RPL29P47914 159 aaKnown RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 TNFSF10P50591 281 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 ARF1P84077 181 aaKnown RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 TFF3Q07654 80 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 AGBL5Q8NDL9 886 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 SFRP2Q96HF1 295 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 ZNF488Q96MN9 340 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 DUSP23Q9BVJ7 150 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 AKIRIN1Q9H9L7 192 aaPredicted RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 MBNL3Q9NUK0 354 aaKnown RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 CBY1Q9Y3M2 126 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 WIPI2Q9Y4P8 454 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 RBM7Q9Y580 266 aaKnown RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 MED12Q93074 2177 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 DNAH14Q0VDD8 3507 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 LY6G6EA0A0G2JKS1 128 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 A0A0G2JMM0 328 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 MDFIC2A0A1B0GVS7 189 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 A0A1W2PPB8 328 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 A0A1W2PRS3 328 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 KIR3DP1A8MWS1 328 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 IFNL4K9M1U5 179 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 NUPR1O60356 82 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 WDR1O75083 606 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 P04436 131 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 ADMP35318 185 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 PMP22Q01453 160 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 TLE1Q04724 770 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 EIF4EBP1Q13541 118 aaPredicted RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 IL11RAQ14626 422 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 TMEM183BQ1AE95 376 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 TPTE2P1Q5T6R2 138 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 ZNF705AQ6ZN79 300 aaPredicted RBP6.14□□□□□ -1.43
USP48-206ENST00000464577 ZNF645Q8N7E2 425 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 TCTEX1D1Q8N7M0 179 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 DTD1Q8TEA8 209 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 ABHD3Q8WU67 409 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 WFIKKN1Q96NZ8 548 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 OR51B6Q9H340 312 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 PARD6AQ9NPB6 346 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 U3KQA8 63 aa6.14□□□□□ -1.43
USP48-206ENST00000464577 RTTNQ86VV8 2226 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 ODAMA1E959 279 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 RAB29O14966 203 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 MRPL33O75394 65 aaKnown RBP6.13□□□□□ -1.43
USP48-206ENST00000464577 KLF7O75840 302 aaPredicted RBP6.13□□□□□ -1.43
USP48-206ENST00000464577 WISP2O76076 250 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 KRASP01116 189 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 CCNOP22674 350 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 ARR3P36575 388 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 CATR1Q13166 79 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 TRIP6Q15654 476 aaKnown RBP6.13□□□□□ -1.43
USP48-206ENST00000464577 SLC23A3Q6PIS1 610 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 TOMM20LQ6UXN7 152 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 Q6ZWC4 215 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 Q8IYB0 196 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 Q8N7P7 452 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 OR1L1Q8NH94 360 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 SGMS2Q8NHU3 365 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 HLA-CQ95604 372 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 SDSLQ96GA7 329 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 POM121L2Q96KW2 1035 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 ZDHHC11Q9H8X9 412 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 OCIAD1Q9NX40 245 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 PLA2G3Q9NZ20 509 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 CLN8Q9UBY8 286 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 TRAPPC2LQ9UL33 140 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 TP53TG3Q9ULZ0 132 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 WDR83OSQ9Y284 106 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 SPAG17Q6Q759 2223 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms