RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 FAM107BQ9H098 131 aa2.9□□□□□ -1.95
PTCD3-205ENST00000464541 WFDC1Q9HC57 220 aa2.9□□□□□ -1.95
PTCD3-205ENST00000464541 CISHQ9NSE2 258 aa2.9□□□□□ -1.95
PTCD3-205ENST00000464541 CMTM6Q9NX76 183 aa2.9□□□□□ -1.95
PTCD3-205ENST00000464541 LINC00527Q9UJ94 153 aa2.9□□□□□ -1.95
PTCD3-205ENST00000464541 ERGIC3Q9Y282 383 aa2.9□□□□□ -1.95
PTCD3-205ENST00000464541 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.9□□□□□ -1.95
PTCD3-205ENST00000464541 IGKV1-27A0A075B6S5 117 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 TRAV8-1A0A0A6YYK1 113 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 FAM159BA6NKW6 160 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 KRBOX1C9JBD0 128 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 BHLHE40O14503 412 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 GYG2O15488 501 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 RGS5O15539 181 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 EIF1BO60739 113 aaKnown RBP2.89□□□□□ -1.95
PTCD3-205ENST00000464541 SCO1O75880 301 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 OR12D1P0DN82 309 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 ZNF708P17019 499 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 IL3RAP26951 378 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 SCN1AP35498 2009 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 POLR2IP36954 125 aaKnown RBP2.89□□□□□ -1.95
PTCD3-205ENST00000464541 EIF1P41567 113 aaKnown RBP2.89□□□□□ -1.95
PTCD3-205ENST00000464541 GTF2A1P52655 376 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-205ENST00000464541 MP68P56378 58 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 CDK5Q00535 292 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 MEF2CQ06413 473 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-205ENST00000464541 PRDX4Q13162 271 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 SSX1Q16384 188 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 GUSBP11Q6P575 273 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 CYHR1Q6ZMK1 362 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 VN1R4Q7Z5H5 301 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 LINC00596Q86U02 117 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 OOSP2Q86WS3 158 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 TMEM256Q8N2U0 113 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 UBL4BQ8N7F7 174 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 APCDD1LQ8NCL9 501 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 OR51A2Q8NGJ7 313 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 BORCS5Q969J3 196 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 C12orf43Q96C57 262 aaKnown RBP2.89□□□□□ -1.95
PTCD3-205ENST00000464541 GPER1Q99527 375 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 SAMD10Q9BYL1 202 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 PYCARDQ9ULZ3 195 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 UTP11Q9Y3A2 253 aaKnown RBP2.89□□□□□ -1.95
PTCD3-205ENST00000464541 OR51B4Q9Y5P0 310 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 CAMSAP1Q5T5Y3 1602 aa2.89□□□□□ -1.95
PTCD3-205ENST00000464541 BRCA1P38398 1863 aaKnown RBP2.88□□□□□ -1.95
PTCD3-205ENST00000464541 EFCAB10A6NFE3 127 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 GPR31O00270 319 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 SERPINA7P05543 415 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 CRYGDP07320 174 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 SOD3P08294 240 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 IMPA1P29218 277 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 CRABP1P29762 137 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 MPIP34949 423 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 NUDT2P50583 147 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 RAB2AP61019 212 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 RPS24P62847 133 aaKnown RBP2.88□□□□□ -1.95
PTCD3-205ENST00000464541 FLI1Q01543 452 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-205ENST00000464541 IAH1Q2TAA2 248 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-205ENST00000464541 GLYATQ6IB77 296 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 LCN8Q6JVE9 175 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 TBPL2Q6SJ96 375 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 FA2HQ7L5A8 372 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 ZNF550Q7Z398 422 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 GRINAQ7Z429 371 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 DPPA2Q7Z7J5 298 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 SMIM20Q8N5G0 67 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 SPANXA2-OT1Q8N9U9 137 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 OR2M7Q8NG81 312 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 OR9I1Q8NGQ6 314 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 OR5H2Q8NGV7 314 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 OR1L1Q8NH94 360 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 OR10J5Q8NHC4 309 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 GNPDA2Q8TDQ7 276 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 OLFM3Q96PB7 478 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 GINS3Q9BRX5 216 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 ZNF649Q9BS31 505 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 MARVELD1Q9BSK0 173 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 TMEM70Q9BUB7 260 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 GNB1LQ9BYB4 327 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 MIXL1Q9H2W2 232 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 IDI2-AS1Q9NZ38 188 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 RSL24D1Q9UHA3 163 aaKnown RBP2.88□□□□□ -1.95
PTCD3-205ENST00000464541 KLF13Q9Y2Y9 288 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-205ENST00000464541 WASHC3Q9Y3C0 194 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 ADGRL1O94910 1474 aa2.88□□□□□ -1.95
PTCD3-205ENST00000464541 NPATQ14207 1427 aa2.87□□□□□ -1.95
PTCD3-205ENST00000464541 PTPRKQ15262 1439 aa2.87□□□□□ -1.95
PTCD3-205ENST00000464541 CCL15-CCL14A0A0B4J2E2 113 aa2.87□□□□□ -1.95
PTCD3-205ENST00000464541 IGHV7-4-1A0A0J9YVY3 117 aa2.87□□□□□ -1.95
PTCD3-205ENST00000464541 M0QZK8 103 aa2.87□□□□□ -1.95
PTCD3-205ENST00000464541 LGALS9O00182 355 aa2.87□□□□□ -1.95
PTCD3-205ENST00000464541 GABARAPL2P60520 117 aa2.87□□□□□ -1.95
PTCD3-205ENST00000464541 HSPE1P61604 102 aaKnown RBP2.87□□□□□ -1.95
PTCD3-205ENST00000464541 TMEM267Q0VDI3 215 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-205ENST00000464541 JOSD1Q15040 202 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-205ENST00000464541 CCL15Q16663 113 aa2.87□□□□□ -1.95
PTCD3-205ENST00000464541 CCDC58Q4VC31 144 aa2.87□□□□□ -1.95
PTCD3-205ENST00000464541 RNASE13Q5GAN3 156 aaKnown RBP2.87□□□□□ -1.95
PTCD3-205ENST00000464541 TEX30Q5JUR7 227 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms