RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RBM38Q9H0Z9 239 aaKnown RBP11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 EXTL2Q9UBQ6 330 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 RSL24D1Q9UHA3 163 aaKnown RBP11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 GAB2Q9UQC2 676 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 NCBP2LA6PVI3 153 aaKnown RBP11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 PROP1O75360 226 aa11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 ARSJQ5FYB0 599 aaPredicted RBP11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 WFDC12Q8WWY7 111 aa11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 SNAPC3Q92966 411 aa11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 RBMXL1Q96E39 390 aaKnown RBP11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 OR2D2Q9H210 308 aa11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 MIXL1Q9H2W2 232 aa11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 NECAP2Q9NVZ3 263 aa11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 SDHAF2Q9NX18 166 aa11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 ADAM30Q9UKF2 790 aa11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 OR2W1Q9Y3N9 320 aa11.56□□□□□ -0.56
SQSTM1-205ENST00000464493 J3QRK9 145 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 ZNF701M0R085 212 aaPredicted RBP11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 FGF16O43320 207 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 MC5RP33032 325 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 SHISA2Q6UWI4 295 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 GLDNQ6ZMI3 551 aaPredicted RBP11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 LAX1Q8IWV1 398 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 C5orf56Q8N8D9 126 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 DRAXINQ8NBI3 349 aaPredicted RBP11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 OR5AP2Q8NGF4 316 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 OR8H1Q8NGG4 311 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 GPX8Q8TED1 209 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 SLIRPQ9GZT3 109 aaKnown RBP11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 C6orf62Q9GZU0 229 aaPredicted RBP11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 SCPEP1Q9HB40 452 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 PLSCR3Q9NRY6 295 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 ANAPC10Q9UM13 185 aa11.55□□□□□ -0.56
SQSTM1-205ENST00000464493 OR5H14A6NHG9 310 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 SH2D7A6NKC9 451 aaPredicted RBP11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 H0YJW9 148 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 M0R1X1 148 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 SULT1C2O00338 296 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 TUSC2O75896 110 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 TPPPO94811 219 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 OR5H8P0DN80 308 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 NAT1P18440 290 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 FCGR2CP31995 323 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 LUMP51884 338 aaPredicted RBP11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 F2RL1P55085 397 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 CDK10Q15131 360 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 C9orf152Q5JTZ5 239 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 FAM131AQ6UXB0 335 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 OR5AN1Q8NGI8 311 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 C15orf40Q8WUR7 153 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 RITA1Q96K30 269 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 SERTAD4Q9NUC0 356 aa11.54□□□□□ -0.56
SQSTM1-205ENST00000464493 H7C2Y5 167 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 VSIG10L2P0DP72 767 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 LINC00205P59089 165 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 KRTAP10-3P60369 221 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 ACTBP60709 375 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 SRSF4Q08170 494 aaKnown RBP11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 LYSMD2Q8IV50 215 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 ZNF645Q8N7E2 425 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 Q8N9W7 124 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 ZNF383Q8NA42 475 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 MCFD2Q8NI22 146 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 DIRAS2Q96HU8 199 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 ABHD1Q96SE0 405 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 DCUN1D5Q9BTE7 237 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 NXF2Q9GZY0 626 aaKnown RBP11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 WASHC3Q9Y3C0 194 aa11.53□□□□□ -0.56
SQSTM1-205ENST00000464493 IGKV1D-13A0A0B4J2D9 117 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 PEX14O75381 377 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 SLC22A5O76082 557 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 PMP2P02689 132 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 IGKV1-13P0DP09 117 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 AADACP22760 399 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 HLA-DMAP28067 261 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 RFX2P48378 723 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 TAS2R46P59540 309 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 MMDQ15546 238 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 TMEM95Q3KNT9 176 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 OVCH2Q7RTZ1 564 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 KLHDC1Q8N7A1 406 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 OR5H2Q8NGV7 314 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 GIMAP1Q8WWP7 306 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 C5orf30Q96GV9 206 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 RASL11BQ9BPW5 248 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 LIN7CQ9NUP9 197 aaKnown RBP11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 NDUFA13Q9P0J0 144 aa11.52□□□□□ -0.57
SQSTM1-205ENST00000464493 IGLV2-14P01704 120 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 APOA2P02652 100 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 CNTFRP26992 372 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 RCVRNP35243 200 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 THBS3P49746 956 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 DYRK1AQ13627 763 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 DHRS11Q6UWP2 260 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 FAM71E2Q8N5Q1 922 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 OR52I2Q8NH67 350 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 DGCR14Q96DF8 476 aaKnown RBP11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 ADTRPQ96IZ2 230 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 RNF5Q99942 180 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms