RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 CEACAM3P40198 252 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 VDAC2P45880 294 aaPredicted RBP4.18□□□□□ -1.74
CD46-211ENST00000464082 RAB7AP51149 207 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 PRRX1P54821 245 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 TMEM50BP56557 158 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 RPS27AP62979 156 aaKnown RBP4.18□□□□□ -1.74
CD46-211ENST00000464082 MLLT11Q13015 90 aaPredicted RBP4.18□□□□□ -1.74
CD46-211ENST00000464082 MADCAM1Q13477 382 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 MED22Q15528 200 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 HMGN3Q15651 99 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 TBCEQ15813 527 aaPredicted RBP4.18□□□□□ -1.74
CD46-211ENST00000464082 NSUN5P1Q3KNT7 163 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 Q3ZCU0 254 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 MORN2Q502X0 79 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 CCDC144NLQ6NUI1 221 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 IZUMO2Q6UXV1 221 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 PRSS48Q7RTY5 328 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 C6orf201Q7Z4U5 140 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 CEACAM19Q7Z692 300 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 NR2C2APQ86WQ0 139 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 IZUMO1Q8IYV9 350 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 FAM89BQ8N5H3 189 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 MS4A15Q8N5U1 240 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 Q8N9W7 124 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 OR5AU1Q8NGC0 362 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 MYDGFQ969H8 173 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 TOMM40LQ969M1 308 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 TMEM203Q969S6 136 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 RPEQ96AT9 228 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 CREB3L1Q96BA8 519 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 NOL4LQ96MY1 436 aaPredicted RBP4.18□□□□□ -1.74
CD46-211ENST00000464082 ZNF251Q9BRH9 671 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 PARP12Q9H0J9 701 aaKnown RBP4.18□□□□□ -1.74
CD46-211ENST00000464082 VCXQ9H320 206 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 ISYNA1Q9NPH2 558 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 CKLFQ9UBR5 152 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 GHRLQ9UBU3 117 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 MOB4Q9Y3A3 225 aa4.18□□□□□ -1.74
CD46-211ENST00000464082 AMMECR1Q9Y4X0 333 aaPredicted RBP4.18□□□□□ -1.74
CD46-211ENST00000464082 TRBV6-6A0A0A6YYG2 114 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 MCRIP1C9JLW8 97 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 CCRL2O00421 344 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 SLC17A2O00624 439 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 SOCS1O15524 211 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 FGF16O43320 207 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 RGS10O43665 173 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 CA11O75493 328 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 ATP6V1G2O95670 118 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 IGHG2P01859 326 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 MNDAP41218 407 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 CLDN12P56749 244 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 HTD2P86397 168 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 CFHR3Q02985 330 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 EMX1Q04741 257 aaPredicted RBP4.17□□□□□ -1.74
CD46-211ENST00000464082 HSD17B12Q53GQ0 312 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 RBM48Q5RL73 367 aaKnown RBP4.17□□□□□ -1.74
CD46-211ENST00000464082 LY6G6FQ5SQ64 297 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 CD200R1LQ6Q8B3 271 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 FAM71E2Q8N5Q1 922 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 WFDC9Q8NEX5 89 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 OR52L2PQ8NGH6 319 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 OR10V1Q8NGI7 309 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 OR10X1Q8NGY0 326 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 NEK7Q8TDX7 302 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 CAPSLQ8WWF8 208 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 THRSPQ92748 146 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 UFD1Q92890 307 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 FYTTD1Q96QD9 318 aaKnown RBP4.17□□□□□ -1.74
CD46-211ENST00000464082 S100A13Q99584 98 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 MGLLQ99685 303 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 HSPB9Q9BQS6 159 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 HDHD3Q9BSH5 251 aaPredicted RBP4.17□□□□□ -1.74
CD46-211ENST00000464082 FAAP24Q9BTP7 215 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 IFI27L2Q9H2X8 130 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 TAF9BQ9HBM6 251 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 SPACA1Q9HBV2 294 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 ACOT13Q9NPJ3 140 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 PCDHB16Q9NRJ7 776 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 SCN3BQ9NY72 215 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 KCNK7Q9Y2U2 307 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 TPRKBQ9Y3C4 175 aa4.17□□□□□ -1.74
CD46-211ENST00000464082 AK6Q9Y3D8 172 aaKnown RBP4.17□□□□□ -1.74
CD46-211ENST00000464082 SAA2-SAA4A0A096LPE2 208 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 IGKV1-6A0A0C4DH72 117 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 TMEM272A0A1B0GTI8 110 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 M0QZK8 103 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 LANCL1O43813 399 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 YPEL1O60688 119 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 PRB2P02812 416 aaPredicted RBP4.16□□□□□ -1.74
CD46-211ENST00000464082 GAPDHP04406 335 aaKnown RBP4.16□□□□□ -1.74
CD46-211ENST00000464082 FGF2P09038 288 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 UBBP0CG47 229 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 FAM106CPP0CH98 169 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 HSMCR30P0CW71 290 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 SAA2P0DJI9 122 aaPredicted RBP4.16□□□□□ -1.74
CD46-211ENST00000464082 TMEM11P17152 192 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 CNTFRP26992 372 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 CALRP27797 417 aaKnown RBP4.16□□□□□ -1.74
CD46-211ENST00000464082 CD1BP29016 333 aa4.16□□□□□ -1.74
CD46-211ENST00000464082 PPIFP30405 207 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms