RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ZNF90Q03938 601 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 OR1Q1Q15612 314 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 ALG10Q5BKT4 473 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 C9orf135Q5VTT2 229 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 UFSP1Q6NVU6 142 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 KCTD18Q6PI47 426 aaPredicted RBP3.07□□□□□ -1.92
COL8A1-205ENST00000463753 SLC25A34Q6PIV7 304 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 UEVLDQ8IX04 471 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 SCCPDHQ8NBX0 429 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 MRPL30Q8TCC3 161 aaKnown RBP3.07□□□□□ -1.92
COL8A1-205ENST00000463753 LMX1AQ8TE12 382 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 GATAD1Q8WUU5 269 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 RNF133Q8WVZ7 376 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 NINJ1Q92982 152 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 RERGQ96A58 199 aaPredicted RBP3.07□□□□□ -1.92
COL8A1-205ENST00000463753 GNPNAT1Q96EK6 184 aaPredicted RBP3.07□□□□□ -1.92
COL8A1-205ENST00000463753 DAZAP1Q96EP5 407 aaKnown RBP3.07□□□□□ -1.92
COL8A1-205ENST00000463753 GMPPAQ96IJ6 420 aaPredicted RBP3.07□□□□□ -1.92
COL8A1-205ENST00000463753 KCNS1Q96KK3 526 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 SIGLEC12Q96PQ1 595 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 TM2D1Q9BX74 207 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 QTRT1Q9BXR0 403 aaKnown RBP3.07□□□□□ -1.92
COL8A1-205ENST00000463753 WDR61Q9GZS3 305 aaKnown RBP3.07□□□□□ -1.92
COL8A1-205ENST00000463753 SH2D2AQ9NP31 389 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 MED29Q9NX70 200 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 CLCF1Q9UBD9 225 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 FBLN5Q9UBX5 448 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 BOKQ9UMX3 212 aaPredicted RBP3.07□□□□□ -1.92
COL8A1-205ENST00000463753 CACNA1CQ13936 2221 aa3.07□□□□□ -1.92
COL8A1-205ENST00000463753 A0A0G2JLM5 398 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 A0A1W2PS18 150 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 TMEM212A6NML5 194 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ANKRD30BLA7E2S9 258 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 C17orf112F2Z3M2 114 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 M0QZQ0 153 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 HRKO00198 91 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 MPPED1O15442 326 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 NRASP01111 189 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 WNT2P09544 360 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 FRMD6-AS1P0C7T7 363 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SMIM17P0DL12 118 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 MGST1P10620 155 aaKnown RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 GPR12P47775 334 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 GPM6AP51674 278 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 TCTAP57738 103 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 FXYD4P59646 89 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PSG4Q00888 419 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 HIST1H1AQ02539 215 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 DLX2Q07687 328 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PMCHL1Q16048 86 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ABCA11PQ4W5N1 156 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PHLDA2Q53GA4 152 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 CARD17Q5XLA6 110 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ABHD17CQ6PCB6 329 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ADAMTSL5Q6ZMM2 481 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 OOSP2Q86WS3 158 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF595Q8IYB9 648 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 Q8N3U1 123 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 LILRA3Q8N6C8 439 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PLPPR1Q8TBJ4 325 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF721Q8TF20 911 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 OR5P3Q8WZ94 311 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 LRRC3BQ96PB8 259 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SPACA5Q96QH8 159 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 AMELYQ99218 206 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PRSS27Q9BQR3 290 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 NDFIP1Q9BT67 221 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 OR2D2Q9H210 308 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PPDPFQ9H3Y8 114 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 GLIPR2Q9H4G4 154 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 BANF2Q9H503 90 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 RPRMQ9NS64 109 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 KCNIP1Q9NZI2 227 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 TRAPPC2LQ9UL33 140 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF443Q9Y2A4 671 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 TIMM8BQ9Y5J9 83 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 VWA8A3KMH1 1905 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 TTC28Q96AY4 2481 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 KBTBD11-OT1A0A1B0GTJ5 212 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PSMB11A5LHX3 300 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 HELTA6NFD8 242 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 TMEM202A6NGA9 273 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 HS3ST1O14792 307 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 LMX1BO60663 402 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF324O75467 553 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 MPIG6BO95866 241 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ABHD16AO95870 558 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 IGLV3-25P01717 112 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 MPC1LP0DKB6 136 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF728P0DKX0 622 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SMIM10L2AP0DMW4 78 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SMIM10L2BP0DMW5 78 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 HIST1H1EP10412 219 aaKnown RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 VDAC1P21796 283 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 HIST1H1TP22492 207 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 HTR1DP28221 377 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SSTR5P35346 364 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PNPLA4P41247 253 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SNU13P55769 128 aaKnown RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SLC35B1P78383 322 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms