RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 FCGR3AP08637 254 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 LUMP51884 338 aaPredicted RBP18.23■□□□□ 0.51
SSNA1-203ENST00000463511 MRPS15P82914 257 aaKnown RBP18.23■□□□□ 0.51
SSNA1-203ENST00000463511 DEFB136Q30KP8 78 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 PRR18Q8N4B5 295 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 OR10X1Q8NGY0 326 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 DGCR14Q96DF8 476 aaKnown RBP18.23■□□□□ 0.51
SSNA1-203ENST00000463511 MIXL1Q9H2W2 232 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 RAB9BQ9NP90 201 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 U3KQK5 164 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 IGHV3-43A0A0B4J1X8 118 aa18.22■□□□□ 0.51
SSNA1-203ENST00000463511 IGHV3-43DP0DP04 118 aa18.22■□□□□ 0.51
SSNA1-203ENST00000463511 LCNL1Q6ZST4 164 aa18.22■□□□□ 0.51
SSNA1-203ENST00000463511 NUDCD2Q8WVJ2 157 aa18.22■□□□□ 0.51
SSNA1-203ENST00000463511 GFOD1Q9NXC2 390 aa18.22■□□□□ 0.51
SSNA1-203ENST00000463511 ZNF230Q9UIE0 474 aaPredicted RBP18.22■□□□□ 0.51
SSNA1-203ENST00000463511 IGHV3-72A0A0B4J1Y9 119 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 HSD17B6O14756 317 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 RAMP3O60896 148 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 RPLP1P05386 114 aaKnown RBP18.21■□□□□ 0.51
SSNA1-203ENST00000463511 SCTP09683 121 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 NHLRC4P0CG21 123 aaPredicted RBP18.21■□□□□ 0.51
SSNA1-203ENST00000463511 PTHLHP12272 177 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 TALDO1P37837 337 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 TAS2R20P59543 309 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 HLA-DRB3P79483 266 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 PITPNAQ00169 270 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 TMEM30BQ3MIR4 351 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 TEX38Q6PEX7 206 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 PRR25Q96S07 402 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 NXF2Q9GZY0 626 aaKnown RBP18.21■□□□□ 0.51
SSNA1-203ENST00000463511 MGAT4AQ9UM21 535 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 STAB2Q8WWQ8 2551 aa18.21■□□□□ 0.51
SSNA1-203ENST00000463511 NCBP2LA6PVI3 153 aaKnown RBP18.2■□□□□ 0.5
SSNA1-203ENST00000463511 TRDCB7Z8K6 153 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 DTYMKP23919 212 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 REG1BP48304 166 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 GNG2P59768 71 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 HTD2P86397 168 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 TMEM69Q5SWH9 247 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 MOB3BQ86TA1 216 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 OR52L2PQ8NGH6 319 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 MAFIPQ8WZ33 124 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 GALMQ96C23 342 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 EAF1Q96JC9 268 aaPredicted RBP18.2■□□□□ 0.5
SSNA1-203ENST00000463511 DCUN1D5Q9BTE7 237 aa18.2■□□□□ 0.5
SSNA1-203ENST00000463511 IGHV1-3A0A0C4DH29 117 aa18.19■□□□□ 0.5
SSNA1-203ENST00000463511 FAM25AB3EWG3 89 aa18.19■□□□□ 0.5
SSNA1-203ENST00000463511 FAM25CB3EWG5 89 aa18.19■□□□□ 0.5
SSNA1-203ENST00000463511 FAM25GB3EWG6 89 aa18.19■□□□□ 0.5
SSNA1-203ENST00000463511 AP4M1O00189 453 aa18.19■□□□□ 0.5
SSNA1-203ENST00000463511 HLA-DQB1P01920 261 aa18.19■□□□□ 0.5
SSNA1-203ENST00000463511 GPR12P47775 334 aa18.19■□□□□ 0.5
SSNA1-203ENST00000463511 ZNF816Q0VGE8 651 aaPredicted RBP18.19■□□□□ 0.5
SSNA1-203ENST00000463511 SRSF7Q16629 238 aaKnown RBP eCLIP18.19■□□□□ 0.5
SSNA1-203ENST00000463511 Q6ZS49 121 aa18.19■□□□□ 0.5
SSNA1-203ENST00000463511 OR2S2Q9NQN1 319 aa18.19■□□□□ 0.5
SSNA1-203ENST00000463511 LSM4Q9Y4Z0 139 aaKnown RBP18.19■□□□□ 0.5
SSNA1-203ENST00000463511 IGKV1D-8A0A087WSZ0 117 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 RGS5O15539 181 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 EBI3Q14213 229 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 GNMTQ14749 295 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 MORN2Q502X0 79 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 CXorf66Q5JRM2 361 aaPredicted RBP18.18■□□□□ 0.5
SSNA1-203ENST00000463511 TGIF2LXQ8IUE1 241 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 LAX1Q8IWV1 398 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 OR10V1Q8NGI7 309 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 OR5M8Q8NGP6 311 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 OR8U1Q8NH10 309 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 MCFD2Q8NI22 146 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 ST6GALNAC5Q9BVH7 336 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 GNG12Q9UBI6 72 aa18.18■□□□□ 0.5
SSNA1-203ENST00000463511 IGKV1-6A0A0C4DH72 117 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 A6NHS1 94 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 GAPDHP04406 335 aaKnown RBP18.17■□□□□ 0.5
SSNA1-203ENST00000463511 GSTT2P0CG29 244 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 GSTT2BP0CG30 244 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 Q3ZCU0 254 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 C9orf66Q5T8R8 295 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 Q8N6K4 173 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 ZNF439Q8NDP4 499 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 IL1F10Q8WWZ1 152 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 LIN7CQ9NUP9 197 aaKnown RBP18.17■□□□□ 0.5
SSNA1-203ENST00000463511 EXTL2Q9UBQ6 330 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 JPT1Q9UK76 154 aa18.17■□□□□ 0.5
SSNA1-203ENST00000463511 FABP7O15540 132 aa18.16■□□□□ 0.5
SSNA1-203ENST00000463511 YPEL1O60688 119 aa18.16■□□□□ 0.5
SSNA1-203ENST00000463511 PPP1CCP36873 323 aaKnown RBP18.16■□□□□ 0.5
SSNA1-203ENST00000463511 ZNF134P52741 427 aa18.16■□□□□ 0.5
SSNA1-203ENST00000463511 KIR2DS1Q14954 304 aa18.16■□□□□ 0.5
SSNA1-203ENST00000463511 LINC00311Q8N616 119 aa18.16■□□□□ 0.5
SSNA1-203ENST00000463511 C8orf31Q8N9H6 132 aa18.16■□□□□ 0.5
SSNA1-203ENST00000463511 Q8N9W7 124 aa18.16■□□□□ 0.5
SSNA1-203ENST00000463511 OR4A4PQ8NGN8 299 aa18.16■□□□□ 0.5
SSNA1-203ENST00000463511 YPEL2Q96QA6 119 aa18.16■□□□□ 0.5
SSNA1-203ENST00000463511 GON7Q9BXV9 100 aa18.16■□□□□ 0.5
SSNA1-203ENST00000463511 C6orf62Q9GZU0 229 aaPredicted RBP18.16■□□□□ 0.5
SSNA1-203ENST00000463511 MRPS7Q9Y2R9 242 aaKnown RBP18.16■□□□□ 0.5
SSNA1-203ENST00000463511 SEC14L6B5MCN3 397 aa18.15■□□□□ 0.5
SSNA1-203ENST00000463511 SLC31A2O15432 143 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms