RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 PSG4Q00888 419 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 AESQ08117 197 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 SPRED2Q7Z698 418 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 VASH2Q86V25 355 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 GTF3AQ92664 365 aaKnown RBP13.62□□□□□ -0.23
SMC4-204ENST00000462787 ANKRD36A6QL64 1941 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 UCP1P25874 307 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 ALKBH7Q9BT30 221 aaPredicted RBP13.61□□□□□ -0.23
SMC4-204ENST00000462787 SIT1Q9Y3P8 196 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 SIPA1L1O43166 1804 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 LOC101059948A0A1B0GTJ6 334 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 ARL14EPLP0DKL9 152 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 LIFP15018 202 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 ZNF137PP52743 207 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 OR8B3Q8NGG8 313 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 PAXXQ9BUH6 204 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 PLSCR2Q9NRY7 297 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 IL36BQ9NZH7 164 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 OR2T8A6NH00 312 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 C14orf144Q96I85 54 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 GAL3ST2Q9H3Q3 398 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 ADCYAP1P18509 176 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 RPL23P62829 140 aaKnown RBP13.61□□□□□ -0.23
SMC4-204ENST00000462787 ZPBPQ9BS86 351 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 LAMTOR2Q9Y2Q5 125 aa13.61□□□□□ -0.23
SMC4-204ENST00000462787 CLDN14O95500 239 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 SNRPCP09234 159 aaKnown RBP13.6□□□□□ -0.23
SMC4-204ENST00000462787 KIR2DL1P43626 348 aaPredicted RBP13.6□□□□□ -0.23
SMC4-204ENST00000462787 KIAA1644Q3SXP7 199 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 MTURNQ8N3F0 131 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 TMEM106BQ9NUM4 274 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 hADV38S2A0JD32 116 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 E9PQ18 207 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 S1PR2O95136 353 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 UQCRFS1P47985 274 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 TRA2AQ13595 282 aaKnown RBP eCLIP13.6□□□□□ -0.235e-7■■□□□ 14
SMC4-204ENST00000462787 GAB4Q2WGN9 574 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 MIC13Q5XKP0 118 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 C18orf12Q96KH6 178 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 AICDAQ9GZX7 198 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 TBL2Q9Y4P3 447 aaKnown RBP13.6□□□□□ -0.23
SMC4-204ENST00000462787 RTP5Q14D33 572 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 NIT1Q86X76 327 aa13.6□□□□□ -0.23
SMC4-204ENST00000462787 LINC00614P0C842 121 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 KLF3P57682 345 aaPredicted RBP13.59□□□□□ -0.23
SMC4-204ENST00000462787 RALYQ9UKM9 306 aaKnown RBP13.59□□□□□ -0.23
SMC4-204ENST00000462787 PRR32B1ATL7 298 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 SPRY3O43610 288 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 CXCL1P09341 107 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 LINC00869P0C866 280 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 P2RY6Q15077 328 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 GBF1Q92538 1859 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 A0A1W2PPE3 182 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 AMBPP02760 352 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 SRFP11831 508 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 TNFRSF1AP19438 455 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 NXPH1P58417 271 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 GPHA2Q96T91 129 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 RPP25Q9BUL9 199 aaKnown RBP13.59□□□□□ -0.23
SMC4-204ENST00000462787 A0A0G2JMZ2 1700 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 LRRC37A2A6NM11 1700 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 TRGV5A0A0B4J1U4 118 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 J3QR06 171 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 DLEU1O43261 78 aa13.59□□□□□ -0.23
SMC4-204ENST00000462787 WDR74Q6RFH5 385 aaPredicted RBP13.59□□□□□ -0.23
SMC4-204ENST00000462787 M0R296 226 aa13.58□□□□□ -0.23
SMC4-204ENST00000462787 MAS1LP35410 378 aa13.58□□□□□ -0.23
SMC4-204ENST00000462787 LYZP61626 148 aa13.58□□□□□ -0.23
SMC4-204ENST00000462787 SNAI3Q3KNW1 292 aa13.58□□□□□ -0.23
SMC4-204ENST00000462787 C1QL2Q7Z5L3 287 aa13.58□□□□□ -0.23
SMC4-204ENST00000462787 ATOH7Q8N100 152 aa13.58□□□□□ -0.23
SMC4-204ENST00000462787 ZNF488Q96MN9 340 aa13.58□□□□□ -0.23
SMC4-204ENST00000462787 LOXL2Q9Y4K0 774 aa13.58□□□□□ -0.23
SMC4-204ENST00000462787 TRIP12Q14669 1992 aaPredicted RBP13.58□□□□□ -0.23
SMC4-204ENST00000462787 NMUP48645 174 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 RELBQ01201 579 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 LRRC10Q5BKY1 277 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 GFI1BQ5VTD9 330 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 Q6ZS52 159 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 SH3BGRL2Q9UJC5 107 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 TMEM56-RWDD3S4R434 201 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 NDUFB3O43676 98 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 ABHD14AQ9BUJ0 271 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 TDRD15B5MCY1 1934 aaKnown RBP13.58□□□□□ -0.24
SMC4-204ENST00000462787 CCL11P51671 97 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 TMEM70Q9BUB7 260 aa13.58□□□□□ -0.24
SMC4-204ENST00000462787 COMPP49747 757 aaPredicted RBP13.57□□□□□ -0.24
SMC4-204ENST00000462787 SFXN3Q9BWM7 321 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 FBLL1A6NHQ2 334 aaKnown RBP13.57□□□□□ -0.24
SMC4-204ENST00000462787 ZNF785A8K8V0 405 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 S100A4P26447 101 aaKnown RBP13.57□□□□□ -0.24
SMC4-204ENST00000462787 NUBP1P53384 320 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 MRPL52Q86TS9 123 aaKnown RBP13.57□□□□□ -0.24
SMC4-204ENST00000462787 OR51B2Q9Y5P1 312 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 SPTBP11277 2137 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 A0A1B0GV72 72 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 ZG16O60844 167 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 SMIM17P0DL12 118 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 CCL3P10147 92 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 ALKBH6Q3KRA9 238 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms