RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 APOA2P02652 100 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 TRGV3P03979 118 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 RANBP1P43487 201 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 SRSF7Q16629 238 aaKnown RBP eCLIP11.88□□□□□ -0.51
SKA3-204ENST00000462482 C19orf54Q5BKX5 351 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 CASC10Q5T4H9 136 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 CEACAM19Q7Z692 300 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 ANKRD13BQ86YJ7 626 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 LFNGQ8NES3 379 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 OR5AN1Q8NGI8 311 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 OR6M1Q8NGM8 313 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 RSRP1Q9BUV0 290 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 VCXQ9H320 206 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 STUB1Q9UNE7 303 aa11.88□□□□□ -0.51
SKA3-204ENST00000462482 C13orf42A0A1B0GVH6 325 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 SPDEFO95238 335 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 SRMP19623 302 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 ZP3P21754 424 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 HLA-DRB3P79483 266 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 PSG5Q15238 335 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 ZNF880Q6PDB4 577 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 LRRTM1Q86UE6 522 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 SGPP2Q8IWX5 399 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 CYYR1Q96J86 154 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 NICN1Q9BSH3 213 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 FAM103A1Q9BTL3 118 aaKnown RBP11.87□□□□□ -0.51
SKA3-204ENST00000462482 C11orf54Q9H0W9 315 aaPredicted RBP11.87□□□□□ -0.51
SKA3-204ENST00000462482 PLGRKTQ9HBL7 147 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 C12orf4Q9NQ89 552 aa11.87□□□□□ -0.51
SKA3-204ENST00000462482 RYR3Q15413 4870 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 TRBV6-6A0A0A6YYG2 114 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 A0A0G2JLM5 398 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 TRIM64CA6NLI5 447 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 TMEM14DPA8MWL7 114 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 CNIH1O95406 144 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 CA2P00918 260 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 GNAO1P09471 354 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 ARSBP15848 533 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 MRPS15P82914 257 aaKnown RBP11.86□□□□□ -0.51
SKA3-204ENST00000462482 CBX3Q13185 183 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 UNC119Q13432 240 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 INSL4Q14641 139 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 GRPEL2Q8TAA5 225 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 RHOVQ96L33 236 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 RANGRFQ9HD47 186 aaPredicted RBP11.86□□□□□ -0.51
SKA3-204ENST00000462482 TPSG1Q9NRR2 321 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 AK3Q9UIJ7 227 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 GAB2Q9UQC2 676 aa11.86□□□□□ -0.51
SKA3-204ENST00000462482 ERICH4A6NGS2 130 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 H3BUA1 57 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 LDLRAD4O15165 306 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 EGR2P11161 476 aaPredicted RBP11.85□□□□□ -0.51
SKA3-204ENST00000462482 FXYD3Q14802 87 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 RCN1Q15293 331 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 SPHARQ15513 63 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 MED22Q15528 200 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 MOGAT2Q3SYC2 334 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 PDPNQ86YL7 162 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 POC5Q8NA72 575 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 DRAXINQ8NBI3 349 aaPredicted RBP11.85□□□□□ -0.51
SKA3-204ENST00000462482 UFD1Q92890 307 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 AGMATQ9BSE5 352 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 PARP12Q9H0J9 701 aaKnown RBP11.85□□□□□ -0.51
SKA3-204ENST00000462482 KCNK15Q9H427 330 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 SCN3BQ9NY72 215 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 OR1A1Q9P1Q5 309 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 HSF4Q9ULV5 492 aa11.85□□□□□ -0.51
SKA3-204ENST00000462482 PTGES3LE9PB15 166 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 SLC25A17O43808 307 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 CDK1P06493 297 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 UCHL1P09936 223 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 P2RY14Q15391 338 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 TATDN3Q17R31 274 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 RNLSQ5VYX0 342 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 PTX4Q96A99 478 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 TMEM68Q96MH6 324 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 CITED4Q96RK1 184 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 CMSS1Q9BQ75 279 aaKnown RBP11.84□□□□□ -0.51
SKA3-204ENST00000462482 LPAR5Q9H1C0 372 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 FKBP14Q9NWM8 211 aa11.84□□□□□ -0.51
SKA3-204ENST00000462482 H0Y980 276 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 M0R1X1 148 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 SOCS1O15524 211 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 ARL6IP5O75915 188 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 SCTP09683 121 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 IGHV4-30-4P0DP06 118 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 SERPINB10P48595 397 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 QRFPP83859 136 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 RAB11BQ15907 218 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 LAIR2Q6ISS4 152 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.83□□□□□ -0.52
SKA3-204ENST00000462482 OR5T1Q8NG75 326 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 FBLIM1Q8WUP2 373 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 ISOC1Q96CN7 298 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 HDHD3Q9BSH5 251 aaPredicted RBP11.83□□□□□ -0.52
SKA3-204ENST00000462482 Q9N2K0 584 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 SLC35D1Q9NTN3 355 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 STAB2Q8WWQ8 2551 aa11.83□□□□□ -0.52
SKA3-204ENST00000462482 A0A0A6YYD4 124 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms