RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ARSBP15848 533 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 CEACAM6P40199 344 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 RANBP1P43487 201 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 HLA-DRB3P79483 266 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 IRF3Q14653 427 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 TRAM1Q15629 374 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 ACTBL2Q562R1 376 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 ACSM6Q6P461 480 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 PPP1R27Q86WC6 154 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 SETD6Q8TBK2 473 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 SLA2Q9H6Q3 261 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 Q9N2K0 584 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 C12orf4Q9NQ89 552 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 SCN3BQ9NY72 215 aa13.8□□□□□ -0.2
SSB-206ENST00000461708 SOCS1O15524 211 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 PROP1O75360 226 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 TFAP2AP05549 437 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 OR8U9P0C7N5 309 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 CD40LGP29965 261 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 TPBGQ13641 420 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 PSG5Q15238 335 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 MED22Q15528 200 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 GLDNQ6ZMI3 551 aaPredicted RBP13.79□□□□□ -0.2
SSB-206ENST00000461708 OR6Q1Q8NGQ2 317 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 UFD1Q92890 307 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 FLYWCH2Q96CP2 140 aaKnown RBP13.79□□□□□ -0.2
SSB-206ENST00000461708 TSNAXQ99598 290 aaKnown RBP13.79□□□□□ -0.2
SSB-206ENST00000461708 ASCL2Q99929 193 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 ALX4Q9H161 411 aaPredicted RBP13.79□□□□□ -0.2
SSB-206ENST00000461708 KCNK15Q9H427 330 aa13.79□□□□□ -0.2
SSB-206ENST00000461708 IGHV4OR15-8A0A075B7B6 117 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 A0A087WW49 117 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 HSPA12AO43301 675 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 ARL6IP5O75915 188 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 HSPB1P04792 205 aaKnown RBP13.78□□□□□ -0.2
SSB-206ENST00000461708 PSMA1P25786 263 aaKnown RBP13.78□□□□□ -0.2
SSB-206ENST00000461708 SLURP1P55000 103 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 LIPKQ5VXJ0 399 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 PDPNQ86YL7 162 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.78□□□□□ -0.2
SSB-206ENST00000461708 RHOVQ96L33 236 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 GFI1Q99684 422 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 HDHD3Q9BSH5 251 aaPredicted RBP13.78□□□□□ -0.2
SSB-206ENST00000461708 PLGRKTQ9HBL7 147 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 OR1A1Q9P1Q5 309 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 METTL1Q9UBP6 276 aaKnown RBP13.78□□□□□ -0.2
SSB-206ENST00000461708 A3GALT2U3KPV4 340 aa13.78□□□□□ -0.2
SSB-206ENST00000461708 SCTP09683 121 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 CPEP16870 476 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 SERPINB10P48595 397 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 TMEM50BP56557 158 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 P2RY14Q15391 338 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 RAB11BQ15907 218 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 UNQ5815/PRO19632Q6UWF5 114 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 TMEM91Q6ZNR0 172 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 LFNGQ8NES3 379 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 ABHD5Q8WTS1 349 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 DUSP21Q9H596 190 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 ZNF221Q9UK13 617 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 GAB2Q9UQC2 676 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 TPRKBQ9Y3C4 175 aa13.77□□□□□ -0.21
SSB-206ENST00000461708 ERICH4A6NGS2 130 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 TRDCB7Z8K6 153 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 H3BUA1 57 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 IGKV1-16P04430 117 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 GP9P14770 177 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 SPNP16150 400 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 PSMD7P51665 324 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 PITPNAQ00169 270 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 SBSPONQ8IVN8 264 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 ZNF383Q8NA42 475 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 CASTOR1Q8WTX7 329 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 ARPC1AQ92747 370 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 TMEM203Q969S6 136 aa13.76□□□□□ -0.21
SSB-206ENST00000461708 CMSS1Q9BQ75 279 aaKnown RBP13.76□□□□□ -0.21
SSB-206ENST00000461708 HUWE1Q7Z6Z7 4374 aaKnown RBP13.76□□□□□ -0.21
SSB-206ENST00000461708 BRI3O95415 125 aa13.75□□□□□ -0.21
SSB-206ENST00000461708 DIRAS3O95661 229 aa13.75□□□□□ -0.21
SSB-206ENST00000461708 CA2P00918 260 aa13.75□□□□□ -0.21
SSB-206ENST00000461708 APOA2P02652 100 aa13.75□□□□□ -0.21
SSB-206ENST00000461708 TPPP2P59282 170 aa13.75□□□□□ -0.21
SSB-206ENST00000461708 DRAXINQ8NBI3 349 aaPredicted RBP13.75□□□□□ -0.21
SSB-206ENST00000461708 OR56B1Q8NGI3 324 aa13.75□□□□□ -0.21
SSB-206ENST00000461708 ARHGAP5-AS1Q96IT6 56 aa13.75□□□□□ -0.21
SSB-206ENST00000461708 OR4C12Q96R67 309 aa13.75□□□□□ -0.21
SSB-206ENST00000461708 FAM103A1Q9BTL3 118 aaKnown RBP13.75□□□□□ -0.21
SSB-206ENST00000461708 PECRQ9BY49 303 aa13.75□□□□□ -0.21
SSB-206ENST00000461708 AK6Q9Y3D8 172 aaKnown RBP13.75□□□□□ -0.21
SSB-206ENST00000461708 TNCP24821 2201 aa13.74□□□□□ -0.21
SSB-206ENST00000461708 IGKV1-6A0A0C4DH72 117 aa13.74□□□□□ -0.21
SSB-206ENST00000461708 LDLRAD4O15165 306 aa13.74□□□□□ -0.21
SSB-206ENST00000461708 FRMD6-AS1P0C7T7 363 aa13.74□□□□□ -0.21
SSB-206ENST00000461708 LGALS7P47929 136 aa13.74□□□□□ -0.21
SSB-206ENST00000461708 VEGFCP49767 419 aa13.74□□□□□ -0.21
SSB-206ENST00000461708 RPS16P62249 146 aaKnown RBP13.74□□□□□ -0.21
SSB-206ENST00000461708 TAGLNQ01995 201 aaKnown RBP13.74□□□□□ -0.21
SSB-206ENST00000461708 MLLT11Q13015 90 aaPredicted RBP13.74□□□□□ -0.21
SSB-206ENST00000461708 FXYD3Q14802 87 aa13.74□□□□□ -0.21
SSB-206ENST00000461708 MOGAT2Q3SYC2 334 aa13.74□□□□□ -0.21
SSB-206ENST00000461708 PLAC9Q5JTB6 97 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms