RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 PIGBOS1A0A0B4J2F0 54 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 MMP23AO75900 390 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 IGHV3-7P01780 117 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 PRRX1P54821 245 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 SRPXP78539 464 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 CATR1Q13166 79 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 LIN54Q6MZP7 749 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 FAM53AQ6NSI3 398 aaPredicted RBP12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 AKAP14Q86UN6 197 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 DRAM1Q8N682 238 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 C8orf31Q8N9H6 132 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 OR9G1Q8NH87 305 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 CHAC2Q8WUX2 184 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 MITD1Q8WV92 249 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 LEAP2Q969E1 77 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 TMEM133Q9H2Q1 129 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 PIPOXQ9P0Z9 390 aa12.42□□□□□ -0.42
TMEM39A-203ENST00000461654 A0A087X0M5 115 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 A0A0B4J2A0 478 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 IGHV2-70DA0A0C4DH43 119 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 C3orf85A0A1B0GTC6 90 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 A0A1B0GX30 115 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 B4DSR2 109 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 RAB29O14966 203 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 TNFSF12O43508 249 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 PGLYRP1O75594 196 aaPredicted RBP12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 HNF1AP20823 631 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 ZFP36P26651 326 aaKnown RBP12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 IL3RAP26951 378 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 DVL1P1P54792 670 aaPredicted RBP12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 ARF6P62330 175 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 CT45A1Q5HYN5 189 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 ZNF66Q6ZN08 573 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 C1orf122Q6ZSJ8 110 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 ZNF439Q8NDP4 499 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 OR13D1Q8NGV5 346 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 CT45A3Q8NHU0 189 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 GALNT14Q96FL9 552 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 ABHD14BQ96IU4 210 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 S1PR3Q99500 378 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 METTL8Q9H825 291 aaKnown RBP12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 LIN7CQ9NUP9 197 aaKnown RBP12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 SHPKQ9UHJ6 478 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 GAB2Q9UQC2 676 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 KPTNQ9Y664 436 aa12.41□□□□□ -0.42
TMEM39A-203ENST00000461654 A0A1W2PPE3 182 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 SRD5A1P18405 259 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 SUPT4H1P63272 117 aaKnown RBP12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 LDLRAD3Q86YD5 345 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 LYG1Q8N1E2 194 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 ABHD12Q8N2K0 398 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 OR10X1Q8NGY0 326 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 TMEM158Q8WZ71 300 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 TNFRSF14Q92956 283 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 HSD17B10Q99714 261 aaKnown RBP12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 AGMATQ9BSE5 352 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 CLEC7AQ9BXN2 247 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 IFI27L2Q9H2X8 130 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 HEXA-AS1Q9H8Q6 139 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 SDHAF2Q9NX18 166 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 MGAT4CQ9UBM8 478 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 MALRD1Q5VYJ5 2156 aa12.4□□□□□ -0.42
TMEM39A-203ENST00000461654 H0Y980 276 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 J3QR06 171 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 SLC31A2O15432 143 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 CCNKO75909 580 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 OR5AC1P0C628 307 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 F2RP25116 425 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 ZNF134P52741 427 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 FCN2Q15485 313 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 LGI3Q8N145 548 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 C11orf42Q8N5U0 333 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 LINC00311Q8N616 119 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 TCTEX1D1Q8N7M0 179 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 OR51H1Q8NH63 302 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 ZNF596Q8TC21 504 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 TCTEX1D2Q8WW35 142 aa12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 POLR3KQ9Y2Y1 108 aaPredicted RBP12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 AMMECR1Q9Y4X0 333 aaPredicted RBP12.39□□□□□ -0.43
TMEM39A-203ENST00000461654 FBN1P35555 2871 aaKnown RBP12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 FAM157AC9JC47 383 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 M0R1X1 148 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 IGLV2-14P01704 120 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 SERPINE2P07093 398 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 SULT1A3P0DMM9 295 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 SULT1A4P0DMN0 295 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 PRTN3P24158 256 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 SP6Q3SY56 376 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 LIAT1Q6ZQX7 453 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 TMEM222Q9H0R3 208 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 LPAR2Q9HBW0 351 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 PRELID3BQ9Y3B1 194 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 KIAA2026Q5HYC2 2103 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 DNHD1Q96M86 4753 aa12.38□□□□□ -0.43
TMEM39A-203ENST00000461654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.437e-8■■■■■ 31.3
TMEM39A-203ENST00000461654 IGHV2-26A0A0B4J1V2 119 aa12.37□□□□□ -0.43
TMEM39A-203ENST00000461654 GOSR2O14653 212 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms