RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 C16orf82Q7Z2V1 217 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 LYSMD2Q8IV50 215 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 OR6Q1Q8NGQ2 317 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 OR56B4Q8NH76 319 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 SMIM4Q8WVI0 70 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 CAPSLQ8WWF8 208 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 KLK11Q9UBX7 282 aa18.02■□□□□ 0.48
C9orf3-209ENST00000460573 ZNF107Q9UII5 783 aaPredicted RBP18.02■□□□□ 0.48
C9orf3-209ENST00000460573 HLA-DMAP28067 261 aa18.01■□□□□ 0.47
C9orf3-209ENST00000460573 FCGR2CP31995 323 aa18.01■□□□□ 0.47
C9orf3-209ENST00000460573 DYRK1AQ13627 763 aa18.01■□□□□ 0.47
C9orf3-209ENST00000460573 ACTBL2Q562R1 376 aa18.01■□□□□ 0.47
C9orf3-209ENST00000460573 CCDC190Q86UF4 302 aa18.01■□□□□ 0.47
C9orf3-209ENST00000460573 AKR1E2Q96JD6 320 aa18.01■□□□□ 0.47
C9orf3-209ENST00000460573 NABP2Q9BQ15 211 aa18.01■□□□□ 0.47
C9orf3-209ENST00000460573 OR2D2Q9H210 308 aa18.01■□□□□ 0.47
C9orf3-209ENST00000460573 EHFQ9NZC4 300 aa18.01■□□□□ 0.47
C9orf3-209ENST00000460573 GSTZ1O43708 216 aaPredicted RBP18■□□□□ 0.47
C9orf3-209ENST00000460573 SNRNP70P08621 437 aaKnown RBP18■□□□□ 0.47
C9orf3-209ENST00000460573 TBPP20226 339 aa18■□□□□ 0.47
C9orf3-209ENST00000460573 ETV6P41212 452 aa18■□□□□ 0.47
C9orf3-209ENST00000460573 DGCR2P98153 550 aa18■□□□□ 0.47
C9orf3-209ENST00000460573 RPL39P5Q59GN2 51 aa18■□□□□ 0.47
C9orf3-209ENST00000460573 RNASE12Q5GAN4 147 aaKnown RBP18■□□□□ 0.47
C9orf3-209ENST00000460573 SPANXN2Q5MJ10 180 aa18■□□□□ 0.47
C9orf3-209ENST00000460573 DHRS7BQ6IAN0 325 aaPredicted RBP18■□□□□ 0.47
C9orf3-209ENST00000460573 DHRS11Q6UWP2 260 aa18■□□□□ 0.47
C9orf3-209ENST00000460573 CCBE1Q6UXH8 406 aaPredicted RBP18■□□□□ 0.47
C9orf3-209ENST00000460573 ZNF736B4DX44 427 aaPredicted RBP17.99■□□□□ 0.47
C9orf3-209ENST00000460573 OR2F2O95006 317 aa17.99■□□□□ 0.47
C9orf3-209ENST00000460573 PMP2P02689 132 aa17.99■□□□□ 0.47
C9orf3-209ENST00000460573 CD24P25063 80 aa17.99■□□□□ 0.47
C9orf3-209ENST00000460573 HRH1P35367 487 aa17.99■□□□□ 0.47
C9orf3-209ENST00000460573 RFX2P48378 723 aa17.99■□□□□ 0.47
C9orf3-209ENST00000460573 HES1Q14469 280 aa17.99■□□□□ 0.47
C9orf3-209ENST00000460573 OR2T10Q8NGZ9 312 aa17.99■□□□□ 0.47
C9orf3-209ENST00000460573 SGMS2Q8NHU3 365 aa17.99■□□□□ 0.47
C9orf3-209ENST00000460573 RBM14Q96PK6 669 aaKnown RBP17.99■□□□□ 0.47
C9orf3-209ENST00000460573 MRPL20Q9BYC9 149 aaKnown RBP17.99■□□□□ 0.47
C9orf3-209ENST00000460573 TAS2R8Q9NYW2 309 aa17.99■□□□□ 0.47
C9orf3-209ENST00000460573 ANK2Q01484 3957 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 OR5H14A6NHG9 310 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 PPYP01298 95 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 IGKV1D-33P01593 117 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 IGKV1-33P01594 117 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 CT45A6P0DMU7 189 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 CT45A5P0DMU8 189 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 CT45A7P0DMV0 189 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 HKR1P10072 659 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 MC5RP33032 325 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 TAS2R19P59542 299 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 MSMO1Q15800 293 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 ZNF645Q8N7E2 425 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 TMEM229BQ8NBD8 167 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 S100ZQ8WXG8 99 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 SDHAF2Q9NX18 166 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 RBMX2Q9Y388 322 aaKnown RBP17.98■□□□□ 0.47
C9orf3-209ENST00000460573 V9GYH0 126 aa17.98■□□□□ 0.47
C9orf3-209ENST00000460573 IGHV3-72A0A0B4J1Y9 119 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 M0QZK8 103 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 PROP1O75360 226 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 NDUFA7O95182 113 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 MOSP00540 346 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 CSF1P09603 554 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 TMEM11P17152 192 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 AADACP22760 399 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 TAGLNQ01995 201 aaKnown RBP17.97■□□□□ 0.47
C9orf3-209ENST00000460573 VAX1Q5SQQ9 334 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 TMEM219Q86XT9 240 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 OR6F1Q8NGZ6 308 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 BORCS5Q969J3 196 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 SLC25A33Q9BSK2 321 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 NPFFR1Q9GZQ6 430 aa17.97■□□□□ 0.47
C9orf3-209ENST00000460573 M0R1X1 148 aa17.96■□□□□ 0.47
C9orf3-209ENST00000460573 CHST1O43916 411 aa17.96■□□□□ 0.47
C9orf3-209ENST00000460573 HERV-K104P61576 105 aa17.96■□□□□ 0.47
C9orf3-209ENST00000460573 TSPAN5P62079 268 aa17.96■□□□□ 0.47
C9orf3-209ENST00000460573 PYDC2Q56P42 97 aa17.96■□□□□ 0.47
C9orf3-209ENST00000460573 RNASE10Q5GAN6 216 aaKnown RBP17.96■□□□□ 0.47
C9orf3-209ENST00000460573 ZNF660Q6AZW8 331 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-209ENST00000460573 OR8H1Q8NGG4 311 aa17.96■□□□□ 0.47
C9orf3-209ENST00000460573 OR5AN1Q8NGI8 311 aa17.96■□□□□ 0.47
C9orf3-209ENST00000460573 ADTRPQ96IZ2 230 aa17.96■□□□□ 0.47
C9orf3-209ENST00000460573 EAF1Q96JC9 268 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-209ENST00000460573 ZNF2Q9BSG1 426 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-209ENST00000460573 RANBP3Q9H6Z4 567 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-209ENST00000460573 C1RLQ9NZP8 487 aa17.96■□□□□ 0.47
C9orf3-209ENST00000460573 IGKV1D-13A0A0B4J2D9 117 aa17.95■□□□□ 0.46
C9orf3-209ENST00000460573 J3QRK9 145 aa17.95■□□□□ 0.46
C9orf3-209ENST00000460573 CD74P04233 296 aa17.95■□□□□ 0.46
C9orf3-209ENST00000460573 IFNA6P05013 189 aa17.95■□□□□ 0.46
C9orf3-209ENST00000460573 IGKV1-13P0DP09 117 aa17.95■□□□□ 0.46
C9orf3-209ENST00000460573 TMEM17Q86X19 198 aa17.95■□□□□ 0.46
C9orf3-209ENST00000460573 ZBTB34Q8NCN2 500 aa17.95■□□□□ 0.46
C9orf3-209ENST00000460573 A0A1B0GUS0 222 aa17.94■□□□□ 0.46
C9orf3-209ENST00000460573 TSPAN9O75954 239 aa17.94■□□□□ 0.46
C9orf3-209ENST00000460573 CD3DP04234 171 aa17.94■□□□□ 0.46
C9orf3-209ENST00000460573 THBS3P49746 956 aa17.94■□□□□ 0.46
C9orf3-209ENST00000460573 SHISA2Q6UWI4 295 aa17.94■□□□□ 0.46
C9orf3-209ENST00000460573 ARRDC1Q8N5I2 433 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms