RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TAF15Q92804 592 aaKnown RBP eCLIP8.48□□□□□ -1.05
UFD1-205ENST00000459854 SPSB4Q96A44 273 aa8.48□□□□□ -1.05
UFD1-205ENST00000459854 SPACA9Q96E40 222 aaPredicted RBP8.48□□□□□ -1.05
UFD1-205ENST00000459854 A0A1B0GW15 77 aa8.48□□□□□ -1.05
UFD1-205ENST00000459854 PROB1E7EW31 1015 aa8.48□□□□□ -1.05
UFD1-205ENST00000459854 H2BFSP57053 126 aa8.48□□□□□ -1.05
UFD1-205ENST00000459854 NUTF2P61970 127 aaKnown RBP8.48□□□□□ -1.05
UFD1-205ENST00000459854 FBLN7Q53RD9 439 aa8.48□□□□□ -1.05
UFD1-205ENST00000459854 ATG4DQ86TL0 474 aaPredicted RBP8.48□□□□□ -1.05
UFD1-205ENST00000459854 PNKDQ8N490 385 aa8.48□□□□□ -1.05
UFD1-205ENST00000459854 ATG2AQ2TAZ0 1938 aa8.48□□□□□ -1.05
UFD1-205ENST00000459854 hADV38S2A0JD32 116 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 NDUFB4O95168 129 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 ASCL5Q7RTU5 278 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 POC1AQ8NBT0 407 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 SARAFQ96BY9 339 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 SF3B6Q9Y3B4 125 aaKnown RBP8.47□□□□□ -1.05
UFD1-205ENST00000459854 TRAV8-7A0A075B6U6 113 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 TYMSP04818 313 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 ISG15P05161 165 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 FGF5P12034 268 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 CTLA4P16410 223 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 CALHM1Q8IU99 346 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 OR1N2Q8NGR9 330 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 OR13G1Q8NGZ3 307 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 DERL1Q9BUN8 251 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 PROCRQ9UNN8 238 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 ANKRD36A6QL64 1941 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 TRBV5-7A0A0A0MS05 114 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 NDUFB3O43676 98 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 CXCL13O43927 109 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 P2RY4P51582 365 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 MESTQ5EB52 335 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 OTPQ5XKR4 325 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 DGAT2L7PQ6IED9 249 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 OR8I2Q8N0Y5 310 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 MISP3Q96FF7 219 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 NUDT11Q96G61 164 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 KIAA1549LQ6ZVL6 1849 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 F5H697 171 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 LIMS1P48059 325 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 SFTPA2Q8IWL1 248 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 NUDT10Q8NFP7 164 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 OR4X2Q8NGF9 303 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 OR10D3Q8NH80 312 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 TMEM170AQ8WVE7 144 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 TMEM190Q8WZ59 177 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 PAXXQ9BUH6 204 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 ASCL3Q9NQ33 180 aa8.47□□□□□ -1.05
UFD1-205ENST00000459854 C1QTNF9BB2RNN3 333 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 OR4A8P0C604 315 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 ERGP11308 486 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 HOXB3P14651 431 aaPredicted RBP8.46□□□□□ -1.05
UFD1-205ENST00000459854 MAS1LP35410 378 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 C19orf48Q6RUI8 117 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 TCF24Q7RTU0 167 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 VOPP1Q96AW1 172 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 CXXC4Q9H2H0 198 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 CCL28Q9NRJ3 127 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 TMEM242Q9NWH2 141 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 SPCS1Q9Y6A9 102 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 RIF1Q5UIP0 2472 aaKnown RBP8.46□□□□□ -1.05
UFD1-205ENST00000459854 CDX4O14627 284 aaPredicted RBP8.46□□□□□ -1.05
UFD1-205ENST00000459854 DLEU1O43261 78 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 SLC25A17O43808 307 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 WISP3O95389 354 aaPredicted RBP8.46□□□□□ -1.05
UFD1-205ENST00000459854 IL2RAP01589 272 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 KLK2P20151 261 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 SRIP30626 198 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 CDAP32320 146 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 PRRX1P54821 245 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 ZNF793Q6ZN11 406 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 ANKRD37Q7Z713 158 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 TTC9CQ8N5M4 171 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 PRDM13Q9H4Q3 707 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 GPR179Q6PRD1 2367 aa8.46□□□□□ -1.05
UFD1-205ENST00000459854 SEC11AP67812 179 aa8.46□□□□□ -1.06
UFD1-205ENST00000459854 SLC35B1P78383 322 aa8.46□□□□□ -1.06
UFD1-205ENST00000459854 RELQ04864 619 aaPredicted RBP8.46□□□□□ -1.06
UFD1-205ENST00000459854 RND1Q92730 232 aa8.46□□□□□ -1.06
UFD1-205ENST00000459854 KCNS1Q96KK3 526 aa8.46□□□□□ -1.06
UFD1-205ENST00000459854 CUL9Q8IWT3 2517 aa8.46□□□□□ -1.06
UFD1-205ENST00000459854 A0A0U1RQV5 110 aa8.46□□□□□ -1.06
UFD1-205ENST00000459854 OR1B1Q8NGR6 318 aa8.46□□□□□ -1.06
UFD1-205ENST00000459854 C12orf49Q9H741 205 aa8.46□□□□□ -1.06
UFD1-205ENST00000459854 ROM1Q03395 351 aa8.45□□□□□ -1.06
UFD1-205ENST00000459854 YRDCQ86U90 279 aaKnown RBP8.45□□□□□ -1.06
UFD1-205ENST00000459854 C17orf82Q86X59 251 aaPredicted RBP8.45□□□□□ -1.06
UFD1-205ENST00000459854 MMD2Q8IY49 270 aa8.45□□□□□ -1.06
UFD1-205ENST00000459854 BATF2Q8N1L9 274 aa8.45□□□□□ -1.06
UFD1-205ENST00000459854 SDHCQ99643 169 aaPredicted RBP8.45□□□□□ -1.06
UFD1-205ENST00000459854 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
UFD1-205ENST00000459854 MRPL32Q9BYC8 188 aaKnown RBP8.45□□□□□ -1.06
UFD1-205ENST00000459854 ZNF665Q9H7R5 613 aa8.45□□□□□ -1.06
UFD1-205ENST00000459854 TINAGQ9UJW2 476 aa8.45□□□□□ -1.06
UFD1-205ENST00000459854 UFC1Q9Y3C8 167 aa8.45□□□□□ -1.06
UFD1-205ENST00000459854 PXMP4Q9Y6I8 212 aa8.45□□□□□ -1.06
UFD1-205ENST00000459854 KNTC1P50748 2209 aa8.45□□□□□ -1.06
UFD1-205ENST00000459854 A0A1W2PQM1 296 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms