RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 C2orf50Q96LR7 162 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 ZNF714Q96N38 554 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 HSD17B10Q99714 261 aaKnown RBP7.39□□□□□ -1.23
VPS50-207ENST00000458530 TMEM222Q9H0R3 208 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 OR2D2Q9H210 308 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 FAM212BQ9NTI7 297 aaPredicted RBP7.39□□□□□ -1.23
VPS50-207ENST00000458530 GFOD1Q9NXC2 390 aa7.39□□□□□ -1.23
VPS50-207ENST00000458530 ARID1AO14497 2285 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 TNFRSF13BO14836 293 aaPredicted RBP7.38□□□□□ -1.23
VPS50-207ENST00000458530 PGLYRP1O75594 196 aaPredicted RBP7.38□□□□□ -1.23
VPS50-207ENST00000458530 SIX6O95475 246 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 CDS2O95674 445 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 RBP4P02753 201 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 CGB3P0DN86 165 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 CGB7P0DN87 165 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 COL8A2P25067 703 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 UCP1P25874 307 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 NUP62P37198 522 aaPredicted RBP7.38□□□□□ -1.23
VPS50-207ENST00000458530 KIR2DS2P43631 304 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 GPR6P46095 362 aaPredicted RBP7.38□□□□□ -1.23
VPS50-207ENST00000458530 GNMTQ14749 295 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 SMCO1Q147U7 214 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 MORN2Q502X0 79 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 HEPN1Q6WQI6 88 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 DRAM1Q8N682 238 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 RNASE11Q8TAA1 199 aaKnown RBP7.38□□□□□ -1.23
VPS50-207ENST00000458530 RFESDQ8TAC1 157 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 UBALD1Q8TB05 177 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 CD300LFQ8TDQ1 290 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 RBPMSQ93062 196 aaKnown RBP7.38□□□□□ -1.23
VPS50-207ENST00000458530 ADTRPQ96IZ2 230 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 TMEM56Q96MV1 263 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 CCL19Q99731 98 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 ABHD14AQ9BUJ0 271 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 BARX1Q9HBU1 254 aaPredicted RBP7.38□□□□□ -1.23
VPS50-207ENST00000458530 PIPOXQ9P0Z9 390 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 TMEM56-RWDD3S4R434 201 aa7.38□□□□□ -1.23
VPS50-207ENST00000458530 FXYD6-FXYD2A0A087WZ82 144 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 IGHV3-43A0A0B4J1X8 118 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 A0A1B0GW55 424 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 HMSDA8MTL9 139 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 ADARB2-AS1A8MUL3 147 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 CCSO14618 274 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 RLN2P04090 185 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 HOXB5P09067 269 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 DUX4L2P0CJ85 424 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 DUX4L3P0CJ86 424 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 DUX4L4P0CJ87 422 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 DUX4L5P0CJ88 424 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 DUX4L6P0CJ89 424 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 DUX4L7P0CJ90 424 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 IGHV3-43DP0DP04 118 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 NFYBP25208 207 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 NKX2-5P52952 324 aaPredicted RBP7.37□□□□□ -1.23
VPS50-207ENST00000458530 LOXL3P58215 753 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 LTC4SQ16873 150 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 C17orf58Q2M2W7 97 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 C2orf68Q2NKX9 166 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 IAH1Q2TAA2 248 aaPredicted RBP7.37□□□□□ -1.23
VPS50-207ENST00000458530 DCAF12L2Q5VW00 463 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 TMEM268Q5VZI3 342 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 GGNBP1Q5YKI7 109 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 DUX4L9Q6RFH8 374 aaPredicted RBP7.37□□□□□ -1.23
VPS50-207ENST00000458530 CIARTQ8N365 385 aaPredicted RBP7.37□□□□□ -1.23
VPS50-207ENST00000458530 OR51H1Q8NH63 302 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 GLYATL2Q8WU03 294 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 MSI2Q96DH6 328 aaKnown RBP7.37□□□□□ -1.23
VPS50-207ENST00000458530 ABHD14BQ96IU4 210 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 TP53RKQ96S44 253 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 DCTN5Q9BTE1 182 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 C19orf12Q9NSK7 152 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 BEX4Q9NWD9 120 aaPredicted RBP7.37□□□□□ -1.23
VPS50-207ENST00000458530 CTSZQ9UBR2 303 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 DUX4Q9UBX2 424 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 RPUSD1Q9UJJ7 312 aaKnown RBP7.37□□□□□ -1.23
VPS50-207ENST00000458530 PSG11Q9UQ72 335 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 GAB2Q9UQC2 676 aa7.37□□□□□ -1.23
VPS50-207ENST00000458530 ANK2Q01484 3957 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 A0A1W2PPR1 153 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 SMLR1H3BR10 107 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 L7N2F9 121 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 OVOL3O00110 214 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 RAB29O14966 203 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 TNFSF12O43508 249 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 ADAP1O75689 374 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 SLC25A4P12235 298 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 SLC25A6P12236 298 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 ZNF16P17020 682 aaPredicted RBP7.36□□□□□ -1.23
VPS50-207ENST00000458530 VDAC1P21796 283 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 IL3RAP26951 378 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 PSMB6P28072 239 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 CDKN1AP38936 164 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 PDLIM4P50479 330 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 GNB2P62879 340 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 SP6Q3SY56 376 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 C11orf87Q6NUJ2 197 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 LYPD2Q6UXB3 125 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 TCF23Q7RTU1 214 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 C5orf24Q7Z6I8 188 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 FAM219AQ8IW50 185 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms