RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 ADAT3Q96EY9 351 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 TP53RKQ96S44 253 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 ATOH8Q96SQ7 321 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 PDFQ9HBH1 243 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 ZNF331Q9NQX6 463 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 MED11Q9P086 117 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 TMEM216Q9P0N5 145 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 NAT8BQ9UHF3 227 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 MCTS1Q9ULC4 181 aaKnown RBP3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 ZFP30Q9Y2G7 519 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 LAMTOR2Q9Y2Q5 125 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 PXMP4Q9Y6I8 212 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 DOCK6Q96HP0 2047 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 SCN10AQ9Y5Y9 1956 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 MED14O60244 1454 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 MAGI1Q96QZ7 1491 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 AKAP11Q9UKA4 1901 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 OVOS2A0A0G2JMS6 1433 aa3.01□□□□□ -1.93
HMGB3P30-201ENST00000457863 PHIPQ8WWQ0 1821 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 WDR62O43379 1518 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 IGHV4-4A0A075B6R2 117 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 hCG_1818297A0A087WSY0 165 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 TRAV4A0A0B4J268 109 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 IGHV1-69DA0A0B4J2H0 117 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 IGKV1-8A0A0C4DH67 115 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 OR4C45A6NMZ5 311 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 RIIAD1A6NNX1 92 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 A8MT66 165 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 FABP5P3A8MUU1 101 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 C9JAW5 83 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 CORTO00230 105 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 OR2H2O95918 312 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 NRASP01111 189 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 SOD3P08294 240 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 CECR9P0C854 216 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 LAMP1P11279 417 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 PPP1CCP36873 323 aaKnown RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 POLR2IP36954 125 aaKnown RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ZNF138P52744 262 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 DEFA1P59665 94 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 FKBP3Q00688 224 aaKnown RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 LOXL1Q08397 574 aaPredicted RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ZNF146Q15072 292 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ZNF404Q494X3 552 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 CLLU1OSQ5K130 101 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 LCE1EQ5T753 118 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 TEX261Q6UWH6 196 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 CXCL17Q6UXB2 119 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ATP5L2Q7Z4Y8 100 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 TRPT1Q86TN4 253 aaKnown RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 C8orf59Q8N0T1 100 aaPredicted RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ACBD7Q8N6N7 88 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 TMEM229BQ8NBD8 167 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 OR2G3Q8NGZ4 309 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 RXFP4Q8TDU9 374 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ORAOV1Q8WV07 137 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 TMEM159Q96B96 161 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ISOC1Q96CN7 298 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 LINC01587Q99440 93 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 OR2H1Q9GZK4 316 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 DEFB127Q9H1M4 99 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 CDC42EP4Q9H3Q1 356 aaKnown RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ZNF702PQ9H963 129 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 CACYBPQ9HB71 228 aaKnown RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ZNF71Q9NQZ8 489 aaPredicted RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 TRMT112Q9UI30 125 aaKnown RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ZNF230Q9UIE0 474 aaPredicted RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 ANAPC10Q9UM13 185 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 HIGD1AQ9Y241 93 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 KLF13Q9Y2Y9 288 aaPredicted RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 PCYT1BQ9Y5K3 369 aaPredicted RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 HEBP2Q9Y5Z4 205 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 SLC25A15Q9Y619 301 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 COL5A2P05997 1499 aaPredicted RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 NUP210Q8TEM1 1887 aaPredicted RBP3□□□□□ -1.93
HMGB3P30-201ENST00000457863 UBR2Q8IWV8 1755 aa3□□□□□ -1.93
HMGB3P30-201ENST00000457863 SETD1AO15047 1707 aaKnown RBP2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 KIAA1551Q9HCM1 1747 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 ARHGEF11O15085 1522 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 CECR2Q9BXF3 1484 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 TRBV19A0A075B6N1 114 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 IGKV1-27A0A075B6S5 117 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 IGHV6-1A0A0B4J1U7 121 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 A0A1B0GW64 132 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 F5H5P2 479 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 M0R143 59 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 OPN1SWP03999 348 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 HLA-DQB2P05538 268 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 IGHV3-43DP0DP04 118 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 AZU1P20160 251 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 CMPK1P30085 196 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 LPAR6P43657 344 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 GABRA2P47869 451 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 CXCL12P48061 93 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 ATP5G3P48201 142 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 NDUFV3P56181 108 aaKnown RBP2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 RPS25P62851 125 aaKnown RBP2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 HBA1P69905 142 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 ERCC8Q13216 396 aa2.99□□□□□ -1.93
HMGB3P30-201ENST00000457863 KIAA0087Q14695 138 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms