RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CDX1P47902 265 aaPredicted RBP15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 ZNF674Q2M3X9 581 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 FAM53AQ6NSI3 398 aaPredicted RBP15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 ZNF525Q8N782 197 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 MSL2Q9HCI7 577 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 FZR1Q9UM11 496 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 PROCRQ9UNN8 238 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 IFNL4K9M1U5 179 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 GATCO43716 136 aaKnown RBP15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 SRP19P09132 144 aaKnown RBP15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 S100A2P29034 98 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 P2RY6Q15077 328 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 SEM1Q6ZVN7 128 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 UFSP2Q9NUQ7 469 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 METRNQ9UJH8 293 aa15.4■□□□□ 0.06
SEMA3B-209ENST00000456560 ZNF891A8MT65 544 aaPredicted RBP15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 FAM90A26D6RGX4 464 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 P0C879 139 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 RPL30P62888 115 aaKnown RBP15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 TLE4Q04727 773 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 MSMO1Q15800 293 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 ZNF343Q6P1L6 599 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 BHLHA15Q7RTS1 189 aaPredicted RBP15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 ZNF429Q86V71 674 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 FAM169BQ8N8A8 192 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 OR2D2Q9H210 308 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 TRAV1-1A0A0B4J248 108 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 IFITM10A6NMD0 228 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 METTL15P1P0C7V9 234 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 GCH1P30793 250 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 COL10A1Q03692 680 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 ZNF506Q5JVG8 444 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 Q8WTZ3 238 aa15.39■□□□□ 0.05
SEMA3B-209ENST00000456560 OR5H1A6NKK0 313 aa15.38■□□□□ 0.05
SEMA3B-209ENST00000456560 CXCL1P09341 107 aa15.38■□□□□ 0.05
SEMA3B-209ENST00000456560 DLK1P80370 383 aa15.38■□□□□ 0.05
SEMA3B-209ENST00000456560 ICAM4Q14773 271 aa15.38■□□□□ 0.05
SEMA3B-209ENST00000456560 C1orf174Q8IYL3 243 aa15.38■□□□□ 0.05
SEMA3B-209ENST00000456560 DOK5Q9P104 306 aa15.38■□□□□ 0.05
SEMA3B-209ENST00000456560 PRR14LQ5THK1 2151 aa15.38■□□□□ 0.05
SEMA3B-209ENST00000456560 A0A087WWC5 75 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 MBD3L4A6NDZ8 208 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 MBD3L3A6NE82 208 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 MBD3L5A6NJ08 208 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 RAMP3O60896 148 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 SCAF4O95104 1147 aaKnown RBP15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 HBE1P02100 147 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 BRWD1-AS2P59051 145 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 ELOBQ15370 118 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 SMIM21Q3B7S5 101 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 PYY3Q5JQD4 70 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 CLDND2Q8NHS1 167 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 MBD3L2Q8NHZ7 208 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 MRGPRDQ8TDS7 321 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 RBMXL1Q96E39 390 aaKnown RBP15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 LURAP1Q96LR2 239 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 PFDN5Q99471 154 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 GAR1Q9NY12 217 aaKnown RBP15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 SLC25A15Q9Y619 301 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 URGCP-MRPS24S4R325 110 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 FRYQ5TBA9 3013 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 ZNF729A6NN14 1252 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 GABRA2P47869 451 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 GLIPR1P48060 266 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 LRRC75BQ2VPJ9 315 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 C9orf152Q5JTZ5 239 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 CYB561D1Q8N8Q1 229 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 SCGB1C1Q8TD33 95 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 TVP23CQ96ET8 276 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 PSMG3Q9BT73 122 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 RSG1Q9BU20 258 aa15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 PARD6GQ9BYG4 376 aaPredicted RBP15.37■□□□□ 0.05
SEMA3B-209ENST00000456560 PAX5Q02548 391 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 SLC25A24Q6NUK1 477 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 ZADH2Q8N4Q0 377 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 CD177Q8N6Q3 437 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 OR13A1Q8NGR1 328 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 RBKSQ9H477 322 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 HSPB7Q9UBY9 170 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 HSPB1P04792 205 aaKnown RBP15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 HBG1P69891 147 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 HBG2P69892 147 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 TNFRSF9Q07011 255 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 TMEM14EPQ6UXP3 125 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 ZNF808Q8N4W9 903 aaPredicted RBP15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 LRRC29Q8WV35 223 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 NIPSNAP3BQ9BS92 247 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 RPRMQ9NS64 109 aa15.36■□□□□ 0.05
SEMA3B-209ENST00000456560 TGIF2-C20orf24A0A0A6YYL0 155 aa15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 ERVFRD-1P60508 538 aa15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 MZT1Q08AG7 82 aa15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 MSMPQ1L6U9 139 aa15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 ZNF600Q6ZNG1 722 aa15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 BEND4Q6ZU67 534 aa15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 ZNF383Q8NA42 475 aa15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 NINJ1Q92982 152 aa15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 INTS1Q8N201 2190 aaKnown RBP15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 C17orf98A8MV24 154 aa15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 SSTR5P35346 364 aa15.35■□□□□ 0.05
SEMA3B-209ENST00000456560 G6PCP35575 357 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms