RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 AADACP22760 399 aa17.54■□□□□ 0.4
PTPRA-208ENST00000455631 ZIK1Q3SY52 487 aaPredicted RBP17.54■□□□□ 0.4
PTPRA-208ENST00000455631 RPP25LQ8N5L8 163 aaKnown RBP17.54■□□□□ 0.4
PTPRA-208ENST00000455631 BVESQ8NE79 360 aa17.54■□□□□ 0.4
PTPRA-208ENST00000455631 OR52I1Q8NGK6 324 aa17.54■□□□□ 0.4
PTPRA-208ENST00000455631 ABHD14BQ96IU4 210 aa17.54■□□□□ 0.4
PTPRA-208ENST00000455631 TSNAXQ99598 290 aaKnown RBP17.54■□□□□ 0.4
PTPRA-208ENST00000455631 LRRC42Q9Y546 428 aa17.54■□□□□ 0.4
PTPRA-208ENST00000455631 NUPR2A6NF83 97 aa17.53■□□□□ 0.4
PTPRA-208ENST00000455631 OR11H12B2RN74 326 aa17.53■□□□□ 0.4
PTPRA-208ENST00000455631 PDCD6O75340 191 aa17.53■□□□□ 0.4
PTPRA-208ENST00000455631 GPX5O75715 221 aa17.53■□□□□ 0.4
PTPRA-208ENST00000455631 SPDEFO95238 335 aa17.53■□□□□ 0.4
PTPRA-208ENST00000455631 MECP2P51608 486 aaKnown RBP17.53■□□□□ 0.4
PTPRA-208ENST00000455631 CCDC58Q4VC31 144 aa17.53■□□□□ 0.4
PTPRA-208ENST00000455631 ZNF343Q6P1L6 599 aa17.53■□□□□ 0.4
PTPRA-208ENST00000455631 Q96M66 194 aa17.53■□□□□ 0.4
PTPRA-208ENST00000455631 TRAV8-7A0A075B6U6 113 aa17.52■□□□□ 0.4
PTPRA-208ENST00000455631 IGKV1-16P04430 117 aa17.52■□□□□ 0.4
PTPRA-208ENST00000455631 GABRB1P18505 474 aa17.52■□□□□ 0.4
PTPRA-208ENST00000455631 RPS16P62249 146 aaKnown RBP17.52■□□□□ 0.4
PTPRA-208ENST00000455631 DRAXINQ8NBI3 349 aaPredicted RBP17.52■□□□□ 0.4
PTPRA-208ENST00000455631 DYNLRB2Q8TF09 96 aa17.52■□□□□ 0.4
PTPRA-208ENST00000455631 PARP12Q9H0J9 701 aaKnown RBP17.52■□□□□ 0.4
PTPRA-208ENST00000455631 A0A0B4J203 849 aa17.51■□□□□ 0.39
PTPRA-208ENST00000455631 H3BNX3 289 aa17.51■□□□□ 0.39
PTPRA-208ENST00000455631 ALPLP05186 524 aa17.51■□□□□ 0.39
PTPRA-208ENST00000455631 LIMS3P0CW19 117 aa17.51■□□□□ 0.39
PTPRA-208ENST00000455631 LIMS4P0CW20 117 aa17.51■□□□□ 0.39
PTPRA-208ENST00000455631 GUCA2BQ16661 112 aa17.51■□□□□ 0.39
PTPRA-208ENST00000455631 FAM46BQ96A09 425 aa17.51■□□□□ 0.39
PTPRA-208ENST00000455631 OR14A2Q96R54 314 aa17.51■□□□□ 0.39
PTPRA-208ENST00000455631 TINAGL1Q9GZM7 467 aaPredicted RBP17.51■□□□□ 0.39
PTPRA-208ENST00000455631 ZNF785A8K8V0 405 aa17.5■□□□□ 0.39
PTPRA-208ENST00000455631 EI24O14681 340 aa17.5■□□□□ 0.39
PTPRA-208ENST00000455631 AIREO43918 545 aa17.5■□□□□ 0.39
PTPRA-208ENST00000455631 LGALS7P47929 136 aa17.5■□□□□ 0.39
PTPRA-208ENST00000455631 SSBP2P81877 361 aaPredicted RBP17.5■□□□□ 0.39
PTPRA-208ENST00000455631 SNAPC3Q92966 411 aa17.5■□□□□ 0.39
PTPRA-208ENST00000455631 SMIM19Q96E16 107 aa17.5■□□□□ 0.39
PTPRA-208ENST00000455631 Q96MT0 163 aa17.5■□□□□ 0.39
PTPRA-208ENST00000455631 COA4Q9NYJ1 87 aa17.5■□□□□ 0.39
PTPRA-208ENST00000455631 KMT2AQ03164 3969 aa17.5■□□□□ 0.39
PTPRA-208ENST00000455631 OR2G6Q5TZ20 316 aa17.49■□□□□ 0.39
PTPRA-208ENST00000455631 C1orf146Q5VVC0 180 aa17.49■□□□□ 0.39
PTPRA-208ENST00000455631 USMG5Q96IX5 58 aa17.49■□□□□ 0.39
PTPRA-208ENST00000455631 SULT4A1Q9BR01 284 aa17.49■□□□□ 0.39
PTPRA-208ENST00000455631 TRBV5-5A0A0J9YX44 114 aa17.48■□□□□ 0.39
PTPRA-208ENST00000455631 SETD6Q8TBK2 473 aa17.48■□□□□ 0.39
PTPRA-208ENST00000455631 A0A1W2PPK0 400 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 DEDDO75618 318 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 PJVKQ0ZLH3 352 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 Q499Y3 187 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 PDPNQ86YL7 162 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 SVOPQ8N4V2 548 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 ZNF383Q8NA42 475 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 TMEM68Q96MH6 324 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 NEDD4LQ96PU5 975 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 OVOL2Q9BRP0 275 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 AGMATQ9BSE5 352 aa17.47■□□□□ 0.39
PTPRA-208ENST00000455631 CHMP1AQ9HD42 196 aaPredicted RBP17.47■□□□□ 0.39
PTPRA-208ENST00000455631 RPL36Q9Y3U8 105 aaKnown RBP17.47■□□□□ 0.39
PTPRA-208ENST00000455631 APOA2P02652 100 aa17.46■□□□□ 0.39
PTPRA-208ENST00000455631 APELAP0DMC3 54 aa17.46■□□□□ 0.39
PTPRA-208ENST00000455631 LINC00205P59089 165 aa17.46■□□□□ 0.39
PTPRA-208ENST00000455631 CEMP1Q6PRD7 247 aaPredicted RBP17.46■□□□□ 0.39
PTPRA-208ENST00000455631 TMPRSS11AQ6ZMR5 421 aa17.46■□□□□ 0.39
PTPRA-208ENST00000455631 KCTD12Q96CX2 325 aaKnown RBP17.46■□□□□ 0.39
PTPRA-208ENST00000455631 A0A0J9YWU9 116 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 BMPR1BO00238 502 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 ITGB1BP1O14713 200 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 OGG1O15527 345 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 RBMXL2O75526 392 aaKnown RBP17.45■□□□□ 0.38
PTPRA-208ENST00000455631 CAPGP40121 348 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 ETV1P50549 477 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 DEFB114Q30KQ6 69 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 RHOXF1Q8NHV9 184 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 WDR89Q96FK6 387 aaPredicted RBP17.45■□□□□ 0.38
PTPRA-208ENST00000455631 PHB2Q99623 299 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 FAAP24Q9BTP7 215 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 GGTLC1Q9BX51 225 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 C11orf54Q9H0W9 315 aaPredicted RBP17.45■□□□□ 0.38
PTPRA-208ENST00000455631 MRPS18AQ9NVS2 196 aaKnown RBP17.45■□□□□ 0.38
PTPRA-208ENST00000455631 OR1A1Q9P1Q5 309 aa17.45■□□□□ 0.38
PTPRA-208ENST00000455631 YIF1BQ5BJH7 314 aa17.44■□□□□ 0.38
PTPRA-208ENST00000455631 SLC16A13Q7RTY0 426 aa17.44■□□□□ 0.38
PTPRA-208ENST00000455631 C6orf201Q7Z4U5 140 aa17.44■□□□□ 0.38
PTPRA-208ENST00000455631 EDARADDQ8WWZ3 215 aa17.44■□□□□ 0.38
PTPRA-208ENST00000455631 KLK5Q9Y337 293 aaPredicted RBP17.44■□□□□ 0.38
PTPRA-208ENST00000455631 PROP1O75360 226 aa17.43■□□□□ 0.38
PTPRA-208ENST00000455631 EDN2P20800 178 aa17.43■□□□□ 0.38
PTPRA-208ENST00000455631 RPS11P62280 158 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTPRA-208ENST00000455631 EWSR1Q01844 656 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTPRA-208ENST00000455631 EXOSC2Q13868 293 aaKnown RBP17.43■□□□□ 0.38
PTPRA-208ENST00000455631 CDH26Q8IXH8 852 aa17.43■□□□□ 0.38
PTPRA-208ENST00000455631 ZC4H2Q9NQZ6 224 aa17.43■□□□□ 0.38
PTPRA-208ENST00000455631 SLC35D1Q9NTN3 355 aa17.43■□□□□ 0.38
PTPRA-208ENST00000455631 BABAM2Q9NXR7 383 aa17.43■□□□□ 0.38
PTPRA-208ENST00000455631 TRBV5-7A0A0A0MS05 114 aa17.42■□□□□ 0.38
PTPRA-208ENST00000455631 LALBAP00709 142 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms