RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PTGES3LE9PB15 166 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 ITGB1BP1O14713 200 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 RAB29O14966 203 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 RGS11O94810 467 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 IGHV3-11P01762 117 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 LGALS1P09382 135 aaKnown RBP12.34□□□□□ -0.43
GPC1-206ENST00000455111 CLDN12P56749 244 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 SPHARQ15513 63 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 MRGPRG-AS1Q2M3A8 158 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 HSD17B12Q53GQ0 312 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 LIPKQ5VXJ0 399 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 ACSM6Q6P461 480 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 TMEM65Q6PI78 240 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 OVCH2Q7RTZ1 564 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 MS4A15Q8N5U1 240 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 SETD6Q8TBK2 473 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 ARPC1AQ92747 370 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 TMEM203Q969S6 136 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 RHOVQ96L33 236 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 MND1Q9BWT6 205 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 Q9N2K0 584 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 RNF150Q9ULK6 438 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 KCNK7Q9Y2U2 307 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 AK6Q9Y3D8 172 aaKnown RBP12.34□□□□□ -0.43
GPC1-206ENST00000455111 LRRC42Q9Y546 428 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 SHISA3A0PJX4 238 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 OR5H14A6NHG9 310 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 LDLRAD4O15165 306 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 BPNT1O95861 308 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 CA2P00918 260 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 CD3GP09693 182 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 INSL3P51460 131 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 LFNGQ8NES3 379 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 OR6M1Q8NGM8 313 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 THRSPQ92748 146 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 PTX4Q96A99 478 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 ARHGAP5-AS1Q96IT6 56 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 MS4A10Q96PG2 267 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 PECRQ9BY49 303 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 KIAA1456Q9P272 454 aa12.33□□□□□ -0.44
GPC1-206ENST00000455111 FOXA2Q9Y261 457 aaPredicted RBP12.33□□□□□ -0.44
GPC1-206ENST00000455111 LINC01619G3V211 115 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 SLC17A2O00624 439 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 SAP30O75446 220 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 LY86O95711 162 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 IGLV2-23P01705 113 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 CRYGBP07316 175 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 FRMD6-AS1P0C7T7 363 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 CEACAM6P40199 344 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 TPBGQ13641 420 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 MED22Q15528 200 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 MOGAT2Q3SYC2 334 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 ZNF429Q86V71 674 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 PPP1R27Q86WC6 154 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 DUSP21Q9H596 190 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 CHMP1AQ9HD42 196 aaPredicted RBP12.32□□□□□ -0.44
GPC1-206ENST00000455111 PLEKHJ1Q9NW61 149 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 GAR1Q9NY12 217 aaKnown RBP12.32□□□□□ -0.44
GPC1-206ENST00000455111 ABRACLQ9P1F3 81 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 METTL1Q9UBP6 276 aaKnown RBP12.32□□□□□ -0.44
GPC1-206ENST00000455111 STEAP1Q9UHE8 339 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 HSF4Q9ULV5 492 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 WASHC3Q9Y3C0 194 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 SMAD5-AS1Q9Y6J3 95 aa12.32□□□□□ -0.44
GPC1-206ENST00000455111 RBMXL2O75526 392 aaKnown RBP12.31□□□□□ -0.44
GPC1-206ENST00000455111 GP9P14770 177 aa12.31□□□□□ -0.44
GPC1-206ENST00000455111 AQP4P55087 323 aa12.31□□□□□ -0.44
GPC1-206ENST00000455111 DEFA5Q01523 94 aa12.31□□□□□ -0.44
GPC1-206ENST00000455111 PJVKQ0ZLH3 352 aa12.31□□□□□ -0.44
GPC1-206ENST00000455111 MOB1BQ7L9L4 216 aa12.31□□□□□ -0.44
GPC1-206ENST00000455111 Q8N1Y9 231 aa12.31□□□□□ -0.44
GPC1-206ENST00000455111 VEGFCP49767 419 aa12.3□□□□□ -0.44
GPC1-206ENST00000455111 FABP5Q01469 135 aa12.3□□□□□ -0.44
GPC1-206ENST00000455111 AKIRIN2Q53H80 203 aa12.3□□□□□ -0.44
GPC1-206ENST00000455111 UNQ5815/PRO19632Q6UWF5 114 aa12.3□□□□□ -0.44
GPC1-206ENST00000455111 ZNF562Q6V9R5 426 aa12.3□□□□□ -0.44
GPC1-206ENST00000455111 RCHY1Q96PM5 261 aa12.3□□□□□ -0.44
GPC1-206ENST00000455111 ADAM30Q9UKF2 790 aa12.3□□□□□ -0.44
GPC1-206ENST00000455111 TENM2Q9NT68 2774 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 TMEM272A0A1B0GTI8 110 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 H7C2Y5 167 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 GSTP1P09211 210 aaKnown RBP12.29□□□□□ -0.44
GPC1-206ENST00000455111 ARSBP15848 533 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 ZBTB25P24278 435 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 MC5RP33032 325 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 MAP2K4P45985 399 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 C2orf76Q3KRA6 126 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 ACTBL2Q562R1 376 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 IL34Q6ZMJ4 242 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 TCTEX1D1Q8N7M0 179 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 UFD1Q92890 307 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 RNF5Q99942 180 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 RDH8Q9NYR8 311 aa12.29□□□□□ -0.44
GPC1-206ENST00000455111 SRRM4A7MD48 611 aaKnown RBP12.28□□□□□ -0.44
GPC1-206ENST00000455111 SLC25A17O43808 307 aa12.28□□□□□ -0.44
GPC1-206ENST00000455111 RBBP9O75884 186 aa12.28□□□□□ -0.44
GPC1-206ENST00000455111 HSPB1P04792 205 aaKnown RBP12.28□□□□□ -0.44
GPC1-206ENST00000455111 TPPP2P59282 170 aa12.28□□□□□ -0.44
GPC1-206ENST00000455111 PLGLAQ15195 96 aa12.28□□□□□ -0.44
GPC1-206ENST00000455111 IGSF11Q5DX21 431 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms