RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 LBHQ53QV2 105 aaPredicted RBP13.29□□□□□ -0.28
SNX17-204ENST00000453453 WDR82Q6UXN9 313 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 LINC00596Q86U02 117 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 MOGAT3Q86VF5 341 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 BATF2Q8N1L9 274 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 OR4D5Q8NGN0 318 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 FAM213BQ8TBF2 198 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 TVP23CQ96ET8 276 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 C20orf24Q9BUV8 137 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 CBLN4Q9NTU7 201 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 PLEKHJ1Q9NW61 149 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 ROS1P08922 2347 aa13.29□□□□□ -0.28
SNX17-204ENST00000453453 USP9XQ93008 2570 aaPredicted RBP13.29□□□□□ -0.28
SNX17-204ENST00000453453 CHD3Q12873 2000 aaKnown RBP13.29□□□□□ -0.28
SNX17-204ENST00000453453 CLEC18AA5D8T8 446 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A10PA6NDY2 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A18PA6NE21 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A16PA6NEW6 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A20PA6NIJ5 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A8PA6NJQ4 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A7PA6NKC0 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A22PA8MWA6 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A12PA8MX19 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A5PA8MXJ8 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A23PA8MXZ1 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A15PP0C7V4 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A13PP0C7W8 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A14PP0C7W9 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 FAM90A24PP0C7X0 464 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 COX6B1P14854 86 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 PPOXP50336 477 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 EWSR1Q01844 656 aaKnown RBP eCLIP13.28□□□□□ -0.28
SNX17-204ENST00000453453 PYY3Q5JQD4 70 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 ZNF826PQ6ZT77 177 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 C11orf53Q8IXP5 236 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 CLEC18CQ8NCF0 446 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 LRRC29Q8WV35 223 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 RTN4IP1Q8WWV3 396 aaPredicted RBP13.28□□□□□ -0.28
SNX17-204ENST00000453453 MAFIPQ8WZ33 124 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 MSI2Q96DH6 328 aaKnown RBP13.28□□□□□ -0.28
SNX17-204ENST00000453453 ZNF488Q96MN9 340 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 SAP30LQ9HAJ7 183 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 DOK5Q9P104 306 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 RCL1Q9Y2P8 373 aaKnown RBP13.28□□□□□ -0.28
SNX17-204ENST00000453453 PIGBOS1A0A0B4J2F0 54 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 LRRC30A6NM36 301 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 H3BQ15 152 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 OR5AC1P0C628 307 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 OR13C7P0DN81 318 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 IRF2P14316 349 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 PPP1CCP36873 323 aaKnown RBP13.28□□□□□ -0.28
SNX17-204ENST00000453453 GPX4P36969 197 aaPredicted RBP13.28□□□□□ -0.28
SNX17-204ENST00000453453 CCL8P80075 99 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 BAXQ07812 192 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 TAF9Q16594 264 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 SMIM21Q3B7S5 101 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 PIGYQ3MUY2 71 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 MOB3AQ96BX8 217 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 RAB39BQ96DA2 213 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 BSCL2Q96G97 398 aaPredicted RBP13.28□□□□□ -0.28
SNX17-204ENST00000453453 UBTD1Q9HAC8 227 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 TMEM242Q9NWH2 141 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 PPP1R3CQ9UQK1 317 aa13.28□□□□□ -0.28
SNX17-204ENST00000453453 IGKV1D-8A0A087WSZ0 117 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 TRAV1-1A0A0B4J248 108 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 IFITM10A6NMD0 228 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 HSD17B6O14756 317 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 GEMIN2O14893 280 aaKnown RBP13.27□□□□□ -0.29
SNX17-204ENST00000453453 GLIPR1P48060 266 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 UBE2KP61086 200 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 ERVK11-1P61568 191 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 PKIAP61925 76 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 PNRC1Q12796 327 aaPredicted RBP13.27□□□□□ -0.29
SNX17-204ENST00000453453 ELOBQ15370 118 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 MPV17LQ2QL34 196 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 KHDC3LQ587J8 217 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 SPSB3Q6PJ21 355 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 TMEM182Q6ZP80 229 aaPredicted RBP13.27□□□□□ -0.29
SNX17-204ENST00000453453 REC114Q7Z4M0 266 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 PLEKHF2Q9H8W4 249 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 RNF7Q9UBF6 113 aa13.27□□□□□ -0.29
SNX17-204ENST00000453453 PUS1Q9Y606 427 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNX17-204ENST00000453453 ADGRG4Q8IZF6 3080 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 ABCA4P78363 2273 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 TRBV23-1A0A0A0MS06 115 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 A1L4Q6 167 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 PPP1R2P9O14990 202 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 OR7C1O76099 320 aaPredicted RBP13.26□□□□□ -0.29
SNX17-204ENST00000453453 CFHR2P36980 270 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 TAGLN2P37802 199 aaKnown RBP13.26□□□□□ -0.29
SNX17-204ENST00000453453 TLE4Q04727 773 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 ZNF674Q2M3X9 581 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 SPIN3Q5JUX0 258 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 OR2C3Q8N628 320 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 Q8TCH9 128 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 NIPSNAP3BQ9BS92 247 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 RAB1BQ9H0U4 201 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 SH3BGRL3Q9H299 93 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 ZNF286AQ9HBT8 521 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 GCM1Q9NP62 436 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms