RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 GATA2P23769 480 aaPredicted RBP6.64□□□□□ -1.35
RIF1-206ENST00000453091 PRDX2P32119 198 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 ZNF581Q9P0T4 197 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 HS3ST3B1Q9Y662 390 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 A0A0U1RQV5 110 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 CD8AP01732 235 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 SRIP30626 198 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 TRA2AQ13595 282 aaKnown RBP eCLIP6.64□□□□□ -1.352e-8■■■□□ 17.3
RIF1-206ENST00000453091 RPL39P5Q59GN2 51 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 WDR73Q6P4I2 378 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 TEPPQ6URK8 271 aa6.64□□□□□ -1.35
RIF1-206ENST00000453091 CXorf1O96002 111 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 PEAR1Q5VY43 1037 aaPredicted RBP6.63□□□□□ -1.35
RIF1-206ENST00000453091 DOLPP1Q86YN1 238 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 TMEM191AQ9H0A3 160 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 GLRX2Q9NS18 164 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 ZNF319Q9P2F9 582 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 DOCK1Q14185 1865 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 IGHV3-35A0A0C4DH35 117 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 FGF12P61328 243 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 CALHM1Q8IU99 346 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 NEU1Q99519 415 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 ISG15P05161 165 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 GPR6P46095 362 aaPredicted RBP6.63□□□□□ -1.35
RIF1-206ENST00000453091 CTAG1AP78358 180 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 TMEM116Q8NCL8 245 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 TMEM167BQ9NRX6 74 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 YTHDF2Q9Y5A9 579 aaKnown RBP6.63□□□□□ -1.35
RIF1-206ENST00000453091 NDUFS6O75380 124 aaKnown RBP6.63□□□□□ -1.35
RIF1-206ENST00000453091 RAB7AP51149 207 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 SIGLEC12Q96PQ1 595 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 H0Y980 276 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 PDE6DO43924 150 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 ZNF735P0CB33 412 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 MEF2BQ02080 365 aaPredicted RBP6.63□□□□□ -1.35
RIF1-206ENST00000453091 ITLN1Q8WWA0 313 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 RPRMQ9NS64 109 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 LYZL4Q96KX0 146 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 CISD1Q9NZ45 108 aaKnown RBP6.63□□□□□ -1.35
RIF1-206ENST00000453091 PRRC2BQ5JSZ5 2229 aaKnown RBP6.63□□□□□ -1.35
RIF1-206ENST00000453091 NPIPB9F8W1W9 429 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 H3BVH4 76 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 SMPD2O60906 423 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 LTBRP36941 435 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 FOXA3P55318 350 aaPredicted RBP6.63□□□□□ -1.35
RIF1-206ENST00000453091 SAP25Q8TEE9 199 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 FAM117AQ9C073 453 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 RNF7Q9UBF6 113 aa6.63□□□□□ -1.35
RIF1-206ENST00000453091 FOCADQ5VW36 1801 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 SRP19P09132 144 aaKnown RBP6.62□□□□□ -1.35
RIF1-206ENST00000453091 CHRDL1Q9BU40 450 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 PAXXQ9BUH6 204 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 PCED1AQ9H1Q7 454 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 DMRT1Q9Y5R6 373 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 MYH9P35579 1960 aaKnown RBP6.62□□□□□ -1.35
RIF1-206ENST00000453091 IGHV3-23P01764 117 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 TMEM97Q5BJF2 176 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 MARS2Q96GW9 593 aaKnown RBP6.62□□□□□ -1.35
RIF1-206ENST00000453091 CARHSP1Q9Y2V2 147 aaKnown RBP6.62□□□□□ -1.35
RIF1-206ENST00000453091 TNFRSF1AP19438 455 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 IBA57Q5T440 356 aaKnown RBP6.62□□□□□ -1.35
RIF1-206ENST00000453091 ZNF788Q6ZQV5 615 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 DRAM1Q8N682 238 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 A0A1W2PR77 199 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 PGPA6NDG6 321 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 TEX30Q5JUR7 227 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 HILPDAQ9Y5L2 63 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 SDK1Q7Z5N4 2213 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 MAP1LC3CQ9BXW4 147 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 PDE4DIPQ5VU43 2346 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 IGKV1D-13A0A0B4J2D9 117 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 MOSP00540 346 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 IGKV1-13P0DP09 117 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 TM4SF20Q53R12 229 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 OR8G5Q8NG78 346 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 PMCHL2Q9BQD1 86 aa6.62□□□□□ -1.35
RIF1-206ENST00000453091 C1QTNF9BB2RNN3 333 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 FTH1P19P0C7X4 201 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 PRF1P14222 555 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 FBXW9Q5XUX1 488 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 ARFGEF1Q9Y6D6 1849 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 IGHV3OR16-13A0A075B7E8 117 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 IGHV3-74A0A0B4J1X5 117 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 SCO2A0A1W2PP80 73 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 AGAP20933 346 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 NUBP1P53384 320 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 UCP2P55851 309 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 HGFACQ04756 655 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 KCNMB1Q16558 191 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 ECSCRQ19T08 205 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 FAM162BQ5T6X4 162 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 PAQR4Q8N4S7 273 aaPredicted RBP6.61□□□□□ -1.35
RIF1-206ENST00000453091 ANKRD12Q6UB98 2062 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 COX6A1P12074 109 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 RND2P52198 227 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 REG4Q9BYZ8 158 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 GCSAMLQ5JQS6 135 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 FAM19A2Q8N3H0 131 aa6.61□□□□□ -1.35
RIF1-206ENST00000453091 IGHV3OR16-8A0A075B7F1 116 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms