RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 KCNG3Q8TAE7 436 aa8.38□□□□□ -1.07
USP1-204ENST00000452143 CYGBQ8WWM9 190 aa8.38□□□□□ -1.07
USP1-204ENST00000452143 PHYHIPQ92561 330 aa8.38□□□□□ -1.07
USP1-204ENST00000452143 GGHQ92820 318 aa8.38□□□□□ -1.07
USP1-204ENST00000452143 CYYR1Q96J86 154 aa8.38□□□□□ -1.07
USP1-204ENST00000452143 AGMATQ9BSE5 352 aa8.38□□□□□ -1.07
USP1-204ENST00000452143 ELOVL1Q9BW60 279 aa8.38□□□□□ -1.07
USP1-204ENST00000452143 TM2D1Q9BX74 207 aa8.38□□□□□ -1.07
USP1-204ENST00000452143 RIMS4Q9H426 269 aaPredicted RBP8.38□□□□□ -1.07
USP1-204ENST00000452143 MGAT4AQ9UM21 535 aa8.38□□□□□ -1.07
USP1-204ENST00000452143 TRBV6-6A0A0A6YYG2 114 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 LCE6AA0A183 80 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 H3BUA1 57 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 IGLV1-51P01701 117 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 EGR2P11161 476 aaPredicted RBP8.37□□□□□ -1.07
USP1-204ENST00000452143 ZP3P21754 424 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 ZBTB25P24278 435 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 SRSF7Q16629 238 aaKnown RBP eCLIP8.37□□□□□ -1.07
USP1-204ENST00000452143 RPL39P5Q59GN2 51 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 C1orf100Q5SVJ3 147 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 UNQ5815/PRO19632Q6UWF5 114 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 C5orf24Q7Z6I8 188 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 PPP1R27Q86WC6 154 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 SGPP2Q8IWX5 399 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 MS4A15Q8N5U1 240 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 CASTOR1Q8WTX7 329 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 ISOC1Q96CN7 298 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 RHOVQ96L33 236 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 TSNAXQ99598 290 aaKnown RBP8.37□□□□□ -1.07
USP1-204ENST00000452143 FAAP24Q9BTP7 215 aa8.37□□□□□ -1.07
USP1-204ENST00000452143 CHMP1AQ9HD42 196 aaPredicted RBP8.37□□□□□ -1.07
USP1-204ENST00000452143 TNCP24821 2201 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 FCN1O00602 326 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 CA2P00918 260 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 IGHV3-11P01762 117 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 IGHV4-30-4P0DP06 118 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 HTR2CP28335 458 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 HLA-DRB3P79483 266 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 UNC119Q13432 240 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 PSG5Q15238 335 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 MOGAT2Q3SYC2 334 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 RBM48Q5RL73 367 aaKnown RBP8.36□□□□□ -1.07
USP1-204ENST00000452143 GLDNQ6ZMI3 551 aaPredicted RBP8.36□□□□□ -1.07
USP1-204ENST00000452143 AHSA2Q719I0 299 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 ANKRD13BQ86YJ7 626 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 PDPNQ86YL7 162 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 DHRSXQ8N5I4 330 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 LFNGQ8NES3 379 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 OR6M1Q8NGM8 313 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 PTX4Q96A99 478 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 ABHD14BQ96IU4 210 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 NICN1Q9BSH3 213 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 FAM103A1Q9BTL3 118 aaKnown RBP8.36□□□□□ -1.07
USP1-204ENST00000452143 EDA2RQ9HAV5 297 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 RANGRFQ9HD47 186 aaPredicted RBP8.36□□□□□ -1.07
USP1-204ENST00000452143 C12orf4Q9NQ89 552 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 PLCXD1Q9NUJ7 323 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 PLEKHJ1Q9NW61 149 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 METTL1Q9UBP6 276 aaKnown RBP8.36□□□□□ -1.07
USP1-204ENST00000452143 PSORS1C1Q9UIG5 152 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 GAB2Q9UQC2 676 aa8.36□□□□□ -1.07
USP1-204ENST00000452143 A0A0G2JLM5 398 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 TMEM14DPA8MWL7 114 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 BPNT1O95861 308 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 APOA2P02652 100 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 TRGV3P03979 118 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 CPEP16870 476 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 VEGFCP49767 419 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 ACSM3Q53FZ2 586 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 OR10K2Q6IF99 312 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 LRRTM1Q86UE6 522 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 C8orf59Q8N0T1 100 aaPredicted RBP8.35□□□□□ -1.07
USP1-204ENST00000452143 Q8N1Y9 231 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 NANOGP1Q8N7R0 232 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 POC5Q8NA72 575 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 SETD6Q8TBK2 473 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 MS4A10Q96PG2 267 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 RSRP1Q9BUV0 290 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 KRTAP4-8Q9BYQ9 185 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 PARP12Q9H0J9 701 aaKnown RBP8.35□□□□□ -1.07
USP1-204ENST00000452143 C19orf73Q9NVV2 129 aa8.35□□□□□ -1.07
USP1-204ENST00000452143 BRI3O95415 125 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 IGKV1-16P04430 117 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 CD37P11049 281 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 QRFPP83859 136 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 INSL4Q14641 139 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 HSD17B12Q53GQ0 312 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 RNLSQ5VYX0 342 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 LAIR2Q6ISS4 152 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.34□□□□□ -1.07
USP1-204ENST00000452143 GRPEL2Q8TAA5 225 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 FBLIM1Q8WUP2 373 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 TMEM68Q96MH6 324 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 CLCC1Q96S66 551 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 SPATA25Q9BR10 227 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 URM1Q9BTM9 101 aaKnown RBP8.34□□□□□ -1.07
USP1-204ENST00000452143 MND1Q9BWT6 205 aa8.34□□□□□ -1.07
USP1-204ENST00000452143 C11orf54Q9H0W9 315 aaPredicted RBP8.34□□□□□ -1.07
USP1-204ENST00000452143 LPAR5Q9H1C0 372 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms