RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ATP5G3P48201 142 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 GNG10P50151 68 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 TMEM147Q9BVK8 224 aa10.62□□□□□ -0.71
UBE3B-204ENST00000449510 SPEGQ15772 3267 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 EPOPA6NHQ4 379 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 TFF1P04155 84 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 OR5G3P0C626 314 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 OR10J4P0C629 311 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 SLC23A3Q6PIS1 610 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 CADM4Q8NFZ8 388 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 OR52L2PQ8NGH6 319 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 C1orf147Q96MC9 270 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-204ENST00000449510 COL4A3Q01955 1670 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 KBTBD11O94819 623 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 NAPSAO96009 420 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 CLPSP04118 112 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 PRB4P10163 310 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-204ENST00000449510 CD82P27701 267 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 GNB2P62879 340 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 TFF3Q07654 80 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 HLA-DRB5Q30154 266 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 TRAT1Q6PIZ9 186 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 ZNF826PQ6ZT77 177 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 ST6GALNAC6Q969X2 333 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 CISD1Q9NZ45 108 aaKnown RBP10.61□□□□□ -0.71
UBE3B-204ENST00000449510 ACACAQ13085 2346 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-204ENST00000449510 MIC13Q5XKP0 118 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 APOBEC3DQ96AK3 386 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-204ENST00000449510 C18orf12Q96KH6 178 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 TECTBQ96PL2 329 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 SRXN1Q9BYN0 137 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 OPN3Q9H1Y3 402 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-204ENST00000449510 DNAJC4Q9NNZ3 241 aa10.61□□□□□ -0.71
UBE3B-204ENST00000449510 KIAA1671Q9BY89 1806 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 MPZP25189 248 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 RAC3P60763 192 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.6□□□□□ -0.71
UBE3B-204ENST00000449510 FGFBP3Q8TAT2 258 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 HS3ST6Q96QI5 342 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 WDR61Q9GZS3 305 aaKnown RBP10.6□□□□□ -0.71
UBE3B-204ENST00000449510 TAAR3PQ9P1P4 343 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 BOKQ9UMX3 212 aaPredicted RBP10.6□□□□□ -0.71
UBE3B-204ENST00000449510 RHBDL1O75783 438 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 IGHV3-48P01763 117 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 SERF2P84101 59 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 LYSMD4Q5XG99 296 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 HSD17B10Q99714 261 aaKnown RBP10.6□□□□□ -0.71
UBE3B-204ENST00000449510 DERL1Q9BUN8 251 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 IGKV3D-11A0A0A0MRZ8 115 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 A0A0G2JRQ6 117 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 GNG4P50150 75 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 LINC00205P59089 165 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 PSG5Q15238 335 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 RAB30Q15771 203 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 PRSS8Q16651 343 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 C1QL4Q86Z23 238 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 ANAPC16Q96DE5 110 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 RTL8AQ9BWD3 113 aa10.6□□□□□ -0.71
UBE3B-204ENST00000449510 PPIHO43447 177 aaKnown RBP10.59□□□□□ -0.71
UBE3B-204ENST00000449510 SRSF10O75494 262 aaKnown RBP10.59□□□□□ -0.71
UBE3B-204ENST00000449510 IRF2P14316 349 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 NUTF2P61970 127 aaKnown RBP10.59□□□□□ -0.71
UBE3B-204ENST00000449510 COTL1Q14019 142 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 COL5A1-AS1Q5SY13 56 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 TMEM164Q5U3C3 297 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 DAZAP1Q96EP5 407 aaKnown RBP10.59□□□□□ -0.71
UBE3B-204ENST00000449510 RBM14Q96PK6 669 aaKnown RBP10.59□□□□□ -0.71
UBE3B-204ENST00000449510 TM2D1Q9BX74 207 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 GPR35Q9HC97 309 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 ATP23Q9Y6H3 246 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 A0A087WWC5 75 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 IFITM10A6NMD0 228 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 MMDQ15546 238 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 SPATA45Q537H7 98 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 TEX38Q6PEX7 206 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 OR4D5Q8NGN0 318 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 OR1L1Q8NH94 360 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 SSBP3Q9BWW4 388 aaPredicted RBP10.59□□□□□ -0.71
UBE3B-204ENST00000449510 SNHG12Q9BXW3 62 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 MRPL18Q9H0U6 180 aaKnown RBP10.59□□□□□ -0.71
UBE3B-204ENST00000449510 RIMS4Q9H426 269 aaPredicted RBP10.59□□□□□ -0.71
UBE3B-204ENST00000449510 LYZL6O75951 148 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 IGHMP01871 453 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 SLC25A45Q8N413 288 aa10.59□□□□□ -0.71
UBE3B-204ENST00000449510 H0Y980 276 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 RAB29O14966 203 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 APELAP0DMC3 54 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 CHRNB4P30926 498 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 ABHD12Q8N2K0 398 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 RPP25LQ8N5L8 163 aaKnown RBP10.58□□□□□ -0.72
UBE3B-204ENST00000449510 RHBDD1Q8TEB9 315 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 NUDT16L1Q9BRJ7 211 aaKnown RBP10.58□□□□□ -0.72
UBE3B-204ENST00000449510 MRPL37Q9BZE1 423 aaKnown RBP10.58□□□□□ -0.72
UBE3B-204ENST00000449510 SEMA5BQ9P283 1151 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 A8MWP6 167 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 GALR2O43603 387 aaPredicted RBP10.58□□□□□ -0.72
UBE3B-204ENST00000449510 FKBP2P26885 142 aaKnown RBP10.58□□□□□ -0.72
UBE3B-204ENST00000449510 IL3RAP26951 378 aa10.58□□□□□ -0.72
UBE3B-204ENST00000449510 RAB7AP51149 207 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms