RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SMIM19Q96E16 107 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF488Q96MN9 340 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 TAF9BQ9HBM6 251 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF256Q9Y2P7 627 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZAR1LA6NP61 321 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 FFAR1O14842 300 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 TAS2R19P59542 299 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 GABARAPL2P60520 117 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 LYZP61626 148 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 PDZK1IP1Q13113 114 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 SAMD13Q5VXD3 122 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 OVCH2Q7RTZ1 564 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 RHOXF1Q8NHV9 184 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 LINC01587Q99440 93 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 CYB5R1Q9UHQ9 305 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 PTPRDP23468 1912 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 PHOX2AO14813 284 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 DCTDP32321 178 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 KIR3DL2P43630 455 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 P2RX3P56373 397 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 RPL24P83731 157 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 FNDC7Q5VTL7 733 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 LINC00596Q86U02 117 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 PPP1R27Q86WC6 154 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR52I1Q8NGK6 324 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 C1orf43Q9BWL3 253 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 SERTAD4Q9NUC0 356 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 CALYQ9NYX4 217 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 IQCF6A8MYZ5 107 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 GABRPO00591 440 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 CRPP02741 224 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 COL8A2P25067 703 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 B3GALT5-AS1P59052 145 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 DLK1P80370 383 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF546Q86UE3 836 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 Q8N402 240 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 CELF2-AS1Q8N7Q2 184 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 NECAP1Q8NC96 275 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR9G4Q8NGQ1 327 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 SFRP2Q96HF1 295 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 MEGF9Q9H1U4 602 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 PLSCR2Q9NRY7 297 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 IDI2-AS1Q9NZ38 188 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 CEP350Q5VT06 3117 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 COX7A2P2O60397 106 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 COX5AP20674 150 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 PTGDSP41222 190 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 FXYD3Q14802 87 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 EFNB3Q15768 340 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 PHYHD1Q5SRE7 291 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 FAM219BQ5XKK7 198 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 ELP2Q6IA86 826 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 TEX261Q6UWH6 196 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF738Q8NE65 137 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 ETV7Q9Y603 341 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 U3KQ87 197 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 IGHV3-21A0A0B4J1V1 117 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 LOC102723971A0A1B0GUV8 181 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 RAB29O14966 203 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 TGOLN2O43493 480 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 NDUFS7O75251 213 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 TBX6O95947 436 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 ALPLP05186 524 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 BCL3P20749 454 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 THBS3P49746 956 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF529Q6P280 563 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 BTNL8Q6UX41 500 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 CFAP77Q6ZQR2 320 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 TMEM123Q8N131 208 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 HSD17B11Q8NBQ5 300 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 UBQLN2Q9UHD9 624 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 MOB4Q9Y3A3 225 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 TMEM129A0AVI4 362 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 STAG3L3P0CL85 134 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 FCN2Q15485 313 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 GGNBP1Q5YKI7 109 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNRF1Q8ND25 227 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR10J6PQ8NGY7 276 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 IGHV3-35A0A0C4DH35 117 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 OVOL1O14753 267 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 PRB2P02812 416 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 PTTG1IPP53801 180 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 FOXG1P55316 489 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 FUT5Q11128 374 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 PHLDA2Q53GA4 152 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 NUDT10Q8NFP7 164 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 NUDT11Q96G61 164 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF75AQ96N20 296 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 ANAPC13Q9BS18 74 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 SMIM3Q9BZL3 60 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 DENND4CQ5VZ89 1909 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 F6UZH7 168 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 AKAIN1P0CW23 69 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 ACOT7LQ6ZUV0 252 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 FAM90A1Q86YD7 464 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 DYRK2Q92630 601 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 GPX7Q96SL4 187 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR2D2Q9H210 308 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 FOXJ3Q9UPW0 622 aa4.73□□□□□ -1.65
CDC42BPA-209ENST00000448940 WASHC3Q9Y3C0 194 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms